Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1389 ATGGCAGTGATAGAAGAAAAAGGCCCTTCAAGTGGGAACGAGGATTACACTCAAGATGGCACAGTGGACCTAAAGGGTAGACCCGTTTTGAGATCAAAGACGGGAAAATGGAAAGCTTGTTCCTTCATAGTAGGGTATGAAGTGTTTGAGAGGATGGCCTTCTACGGGATACAATCAAACCTAGTGATATATCTAACTAATAAGCTCCATGAGGGCACTGTGACAGCTTCAAACAACGTTAGCAACTGGGTGGGTGCAGTGTGGATGATGCCACTGGCAGGAGCTTACATAGCCGATGCCCATCTTGGCCGATATAAGACCTTTGTAATTGCGTCATGCATCTATATTCTGGGAATGTGTCTGTTGACTCTAGCAGTTTCACTACCAGCTCTGAGGCCATCACCATGTGACCAAGGCCAGAATTGCCCACGGGCATCGTCATTGCAGTATGGTATTTTCTTCTTGGCCCTTTACATCGTTGCAATAGGCACAGGGGGAACCAAGCCCAACATTTCTACCATGGGAGCTGACCAATTTGATGAGTTTGAGCCCAAAGAGAGATCCCACAAGCTTTCCTTCTTCAATTGGTGGTTCTTTAGTATTTTCTTTGGTACCCTTTTCTCCAACACTTTCTTGGTATACTTACAAGACAATAAGGGTTGGGCCATTGGGTATGGCCTTCCCACCCTTGGGCTTGTTATTTCAGTAGTGGTGTTTCTGGTAGGAACTCCATTTTATAGACACAAATTGCCATCAGGTAGCCCAGTAACAAGGATGCTTCAGGTATATGTTGCTGCTGGGAGCAACTGGAAGCTGCATGTCCCAGACGATCCGAAAGAGCTACATGAGCTGAGCATTGAAGAGTATGCAAGTAATGGGAGAAACAGAATTGATCGGAGCTCCTCATTGAGTTTCCTTGACAAAGCAGCTATAAAGACTGGCCAAACATCACCATGGATGCTTTGCACAGTGACCCAAGTAGAGGAAACCAAGCAAATGACAAAACTGATTCCTCTCTTGCTTACAACGATTATTCCAAGCACCTTGGTAGTTCAAGCGAGCACACTCTTTGTCAAACAAGGCACCACACTAGACAGGAGTATGGGACCCCATTTCCAAATCCCCCCGGCATGTCTCAACGCATTTGTTACCATCTCCATGCTGATAACCATCGTTGTCTACGACCGAGCTTTCGTTCCCGCTATCCGGCGCTACACGAAGAACCCCAGAGGGATCACAATGCTGCAGAGACTCGGCATTGGACTTGTGATGCATGTCTTCATAATGATCATTGCATGCTTTGCTGAAAGAAGGAGACTCAAGGTTGCAAGAGAAAACCACCTCTTTGGTCTGCATGATACAATTCCTCTCACTATTTTCATCCTCTTACCTCAGTATGCTTTGGGAGGGGTTGCTGATAACTTTGTTGAAGTTGCCAAGATAGAGATATTCTATGATCAAGCACCAGATGGCATGAAAAGTCTTGGAACAGCATATTTCACGACCACCTTAGGTATTGGAAGTTTTCTCAGCAGTTTTCTTCTGTCAACTGTTGCTGATGTCACCAAGAGACATGGCCACAATGGTTGGATTTTGAATAATCTAAACGTCTCCCGTTTAGATTATTATTATGCTTTCATGGCTGTACTTAGCTTTCTCAACTTTCTCTGCTTTTTGGTTGTTGCCAAGTTCTTTGTCTATAATGTTGATGTTACACAAACCAAATCCGGCTCGGAGATTAACCCCTCTTCATCACAGGAACAGGACAATACTGGAATAAGCCCAAGTATCCCACAACCAGATGGCAAATCCTAG 1815 0.449 MAVIEEKGPSSGNEDYTQDGTVDLKGRPVLRSKTGKWKACSFIVGYEVFERMAFYGIQSNLVIYLTNKLHEGTVTASNNVSNWVGAVWMMPLAGAYIADAHLGRYKTFVIASCIYILGMCLLTLAVSLPALRPSPCDQGQNCPRASSLQYGIFFLALYIVAIGTGGTKPNISTMGADQFDEFEPKERSHKLSFFNWWFFSIFFGTLFSNTFLVYLQDNKGWAIGYGLPTLGLVISVVVFLVGTPFYRHKLPSGSPVTRMLQVYVAAGSNWKLHVPDDPKELHELSIEEYASNGRNRIDRSSSLSFLDKAAIKTGQTSPWMLCTVTQVEETKQMTKLIPLLLTTIIPSTLVVQASTLFVKQGTTLDRSMGPHFQIPPACLNAFVTISMLITIVVYDRAFVPAIRRYTKNPRGITMLQRLGIGLVMHVFIMIIACFAERRRLKVARENHLFGLHDTIPLTIFILLPQYALGGVADNFVEVAKIEIFYDQAPDGMKSLGTAYFTTTLGIGSFLSSFLLSTVADVTKRHGHNGWILNNLNVSRLDYYYAFMAVLSFLNFLCFLVVAKFFVYNVDVTQTKSGSEINPSSSQEQDNTGISPSIPQPDGKS* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1389 604 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 19 578 - -
Gso19g1389 604 MobiDBLite consensus disorder prediction 1 20 - -
Gso19g1389 604 SUPERFAMILY MFS general substrate transporter 27 562 IPR036259 -
Gso19g1389 604 Pfam POT family 105 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso19g1389 604 MobiDBLite consensus disorder prediction 575 598 - -
Gso19g1389 604 MobiDBLite consensus disorder prediction 575 604 - -
Gso19g1389 604 CDD MFS_NPF5 37 567 IPR044739 GO:0042937|GO:0042938|GO:0071916
Gso19g1389 604 Gene3D MFS general substrate transporter like domains 9 573 IPR036259 -
Gso19g1389 604 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 578 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1389 Gso-Chr19 42723968 42727877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1389 4 583 Organic Solute Cotransporters AT5G46040 59.658 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1389 - - gmx:100807002 1192.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1389 19 42723968 42727877 Gso3g1395 3 39913238 39916583 GST
Gso19g1389 19 42723968 42727877 Gso10g0046 10 550626 557093 PCT