Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0046 ATGGAAGAGGGAAGGGTTGTGAGTGAGTACACAAAAGATGGAACTGTGGATCTTAAAGGGAAACCCATTCTCAAATCCAAAAGTGGTGGTTGGAAAGCATGCTCCTTTGTTGTTGTGTACGAGATATTTGAAAGAATGGCTTATTATGGAATATCATCAAATTTGATACTGTATCTGACAAGGAAGCTTCACCAAGGCACTGTGACCTCTTCCAACAACGTCACCAATTGGGTTGGCACCATTTGGATAACTCCTATCTTAGGAGCCTACGTTGCCGATGCTCATCTTGGTCGCTTTTGGACTTTTCTCATTGCCTCAGTCATCTATTTATTGGGTATGTCTCTACTTACGCTATCGGTGTCCCTTCCAAGCCTAAAGCCACCAGAGTGCCATGAATTGGATGTGACAAAATGTGAAAAAGCCTCCACACTACATCTAGCTGTGTTCTATGGTGCACTCTACACTCTTGCACTAGGAACCGGTGGAACCAAGCCAAACATTTCCACAATTGGTGCTGACCAATTTGATGACTTTGACTCCAAAGAGAAGAAGCTCAAGCTCTCCTTCTTCAATTGGTGGATGTTTAGCATCTTCATTGGGACCCTCTTTGCAAATTCTGTTCTGGTCTATATACAAGACAATGTGGGGTGGACTCTTGGGTATGCTCTTCCCACTCTTGGACTTGCAATATCAATCATCATATTCTTGGCAGGCACACCCTTTTATAGACACAAATTGCCCACGGGGAGTCCATTCACTAAGATGGCCAAGGTCATAGTGGCTGCTATAAGGAAATGGAAAGTGCATATTCCTAGTGACACTAAAGAACTTTATGAGCTTGATTTGGAAGAGTATGCCAAGAGAGGGAGAGTCAGAATTGATTCCACTCCAACCTTGAGGTTCCTCAACAAGGCATGTGTCAACACCGATTCAAGTACTAGTGGATGGAAGCTAAGCCCTGTTACCCATGTGGAGGAGACCAAACAAATGCTAAGAATGATCCCAATCTTGGCTGCTACATTGATCCCTAGTGCAATGGTTGCACAAATAGGTACCCTTTTTGTGAAGCAAGGGATTACACTTGACAGAGGCATTGGCAGCTTCAATATACCCCCGGCAAGTTTAGCCACATTTGTGACTCTATCCATGCTTGTATGTGTGGTGCTCTATGACCGTTTCTTTGTCAAGATCATGCAAAGGTTTACCAAGAACCCTAGAGGGATAACCCTTCTCCAAAGGATTGGAATTGGCCTCATAATCCACATAGTGATTATGGTGATTGCATCTCTAACTGAAAGGTATAGACTTAGAGTGGCCAAAGAACATGGGCTATTAGAAAATGGAGGACAAGTTCCTTTGAGCATTTTCATCTTGCTTCCTCAATATGTTCTTATGGGAGCAGCTGATGCGTTTGTCGAGGTTGCCAAAATCGAGTTTTTCTATGACCAAGCCCCAGAAAGCATGAAGAGCCTTGGCACTTCCTATTCAATGACTACCTTAGGCATTGGGAATTTCCTAAGCACTTTTCTTCTCACAACAATTTCACATGTCACCAAGAAACATGGCCACCGAGGATGGGTTTTGAACAACTTGAATGCTTCTCATCTTGACTACTACTATGCACTTTTGGCCATACTAAACTTGGTGAACTTCGTATTCTTCATGGTTGTGACAAAGTTCTATGTGTATAGAGCTGAAATTTCAGATTCCATAAAAGTGCTTGAGGAAGAGCTCAAGGAAAAGACATCAAACCAGGTGATTCCAAGAGATTAA 1773 0.4287 MEEGRVVSEYTKDGTVDLKGKPILKSKSGGWKACSFVVVYEIFERMAYYGISSNLILYLTRKLHQGTVTSSNNVTNWVGTIWITPILGAYVADAHLGRFWTFLIASVIYLLGMSLLTLSVSLPSLKPPECHELDVTKCEKASTLHLAVFYGALYTLALGTGGTKPNISTIGADQFDDFDSKEKKLKLSFFNWWMFSIFIGTLFANSVLVYIQDNVGWTLGYALPTLGLAISIIIFLAGTPFYRHKLPTGSPFTKMAKVIVAAIRKWKVHIPSDTKELYELDLEEYAKRGRVRIDSTPTLRFLNKACVNTDSSTSGWKLSPVTHVEETKQMLRMIPILAATLIPSAMVAQIGTLFVKQGITLDRGIGSFNIPPASLATFVTLSMLVCVVLYDRFFVKIMQRFTKNPRGITLLQRIGIGLIIHIVIMVIASLTERYRLRVAKEHGLLENGGQVPLSIFILLPQYVLMGAADAFVEVAKIEFFYDQAPESMKSLGTSYSMTTLGIGNFLSTFLLTTISHVTKKHGHRGWVLNNLNASHLDYYYALLAILNLVNFVFFMVVTKFYVYRAEISDSIKVLEEELKEKTSNQVIPRD* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0046 590 Coils Coil 564 584 - -
Gso10g0046 590 Gene3D MFS general substrate transporter like domains 4 569 IPR036259 -
Gso10g0046 590 CDD MFS_NPF5 31 563 IPR044739 GO:0042937|GO:0042938|GO:0071916
Gso10g0046 590 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 14 573 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso10g0046 590 SUPERFAMILY MFS general substrate transporter 24 559 IPR036259 -
Gso10g0046 590 PANTHER PEPTIDE TRANSPORTER 14 573 - -
Gso10g0046 590 Pfam POT family 99 527 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0046 Gso-Chr10 550626 557093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0046 5 577 Organic Solute Cotransporters AT5G46040 66.261 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0046 - - gmx:100813385 1118.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1389 19 42723968 42727877 Gso10g0046 10 550626 557093 PCT
Gso3g1395 3 39913238 39916583 Gso10g0046 10 550626 557093 PCT