Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1289 ATGGGCATTAATCCAACAAAATATGCAACAATTGCGATTTGTTTGTTTTGCCTATGGAGTGTTGCTGAGTGTATCCCCAACACCAGCATCATCAATGTTCTCTGCAACAATGGGGTGTACACTTCTGGGGACCCTTTTGCTATTAGTCTAAGCTATGTTTTTGGGGACTTAGAGAAGGAAACACCAGCACAGAAGAATTATGACTACCACAACATTTCACCCTATCCTAATGCCTATGCCTATGGGCATGCTACTTGTAACCTTAATCTGACATCCTCTGATTGCAAAACATGTCTTGGTGCTGCTAAAGCGGCCTTGTTTAGCACATGCCAGACACCACGGATCGGGGCTCGTTCGGTGCTCTATGATTGTGCAATCAGGTACGAGCAATACCCATTTGACGATTAG 408 0.4436 MGINPTKYATIAICLFCLWSVAECIPNTSIINVLCNNGVYTSGDPFAISLSYVFGDLEKETPAQKNYDYHNISPYPNAYAYGHATCNLNLTSSDCKTCLGAAKAALFSTCQTPRIGARSVLYDCAIRYEQYPFDD* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1289 135 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Gso19g1289 135 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 134 - -
Gso19g1289 135 Pfam Salt stress response/antifungal 35 131 IPR002902 -
Gso19g1289 135 Gene3D - 13 133 IPR038408 -
Gso19g1289 135 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1289 Gso-Chr19 41461680 41462087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1289 - - gmx:102664018 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1289 19 41461680 41462087 Gso3g1288 3 38619304 38619675 GST
Gso19g1289 19 41461680 41462087 Gso10g0222 10 2310082 2310486 PCT
Gso10g0222 10 2310082 2310486 Gso19g1289 19 41461680 41462087 PCT