Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0222 ATGGGTATTCCTTCAGAAATTGCAGCAGTTGGGGTTGTTTTGTTGTGGCTGTGGAGTGTTGCCGTGGACAGTGTTCCCAACACCAACATCACTGCCATTCTGTGCAACGTTGGGGCGTACAGCTCAGGTGATCCTTTTGCTGTGAGTTTATCCTATGTTGTTGGAGAATTGGAGACAGAGACTCCAACCAGGAAAAACTACGATTACTACAACATTTCTCCTTATCCTAATGCATTTGCCTATGGACATGCTGCTTGCAACATTAATCTGACTGCCACTGACTGCAAAACCTGTCTCGGTGTTGCTAAAACATCCGTGTTCAACGGGTGTCCGAAGCGTGTAGGAGCTCGTTCGGTGCTGCATGATTGTACAATCAGGTATGAGCAGTACCCATTTGATGATTGA 405 0.4642 MGIPSEIAAVGVVLLWLWSVAVDSVPNTNITAILCNVGAYSSGDPFAVSLSYVVGELETETPTRKNYDYYNISPYPNAFAYGHAACNINLTATDCKTCLGVAKTSVFNGCPKRVGARSVLHDCTIRYEQYPFDD* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0222 134 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Gso10g0222 134 Gene3D - 27 132 IPR038408 -
Gso10g0222 134 ProSiteProfiles Gnk2-homologous domain profile. 28 132 IPR002902 -
Gso10g0222 134 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 133 - -
Gso10g0222 134 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0222 Gso-Chr10 2310082 2310486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0222 28 134 Receptor kinase-like Gene Family AT5G40380 26.852 2.60e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0222 - - gmx:102666546 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1289 19 41461680 41462087 Gso10g0222 10 2310082 2310486 PCT
Gso3g1288 3 38619304 38619675 Gso10g0222 10 2310082 2310486 PCT
Gso10g0222 10 2310082 2310486 Gso19g1289 19 41461680 41462087 PCT
Gso10g0222 10 2310082 2310486 Gso3g1288 3 38619304 38619675 PCT