Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1243 ATGGAGGAAGAAGAAGACCAGCAGAAGCTTCCAGATCTGGTGAAGGCACTCGTCCACCACCTACTCTCCCTAAATCTCCCCCCAAATTCCCCTCCCCTCAACCCTAACTCCCCCGAATTCCGCAACTCCCTCCGCTACGCCCTCCGCATCCTCTCCAGCCGCCTCACCCCCTCCGTTGCCCCCGACGCCGCCGCCATCGCCGACTCCATCAAGCGCCGCCTCGCCTCCTACGGCCACTCCTCCCAAGCCCTCTCCTTCGCCGACCTCTTCTCCAAATTCGCCTCCAAAGCCCAAAGTGTCGACAAAAAATGGGCCCTCATCTACCTCCTCAAAATCATCTCCGAAGATCGCCACAACAACACCACCGCCACCACTCTCCTCCCCAACCTCAATTTCTCCGAACCAGCAACCTCCAACAAACCCTCCAACAACGGCGGCGTCCTATTAGTCTCCAAGGACCCCGAGAATCGCCGCGACATCGCGTTTCTCGAGTTCGTCAAATTAGTCCGGGAAGAAAACGAGGTGTCGGAAGAGGTTCTCGTCCAAGACGTGCTCTATGCTTGCCAAGGAGTGGATGGTAAGTTTGTGAAACTTGACAGCGAGAGTAAGCGTTATGTGATACCCGTTTCAATTAGGGTTCCCAGAGCCCCTAGGAGTATGGTTTACAACCTCTGTGAGTTGGGGGTTTTGTTTAGGAAGGTTAGCGGTTACATTTCGCGGAGTATGGATCGGTTCCCCAATGAAGATGTGGGAACTGTGGGCCAAGCTTTTTGCTCCGCTTTGCAGGATGAGCTTAGTGAGTATTATAAGTTGCTGGCGGTTCTTGAGGCGCAGGCTTCAAACCCTATTCCTTTGGTTTCGGAATCTGCGAGCTCCAGGAACTATCTATCGCTGAGGAGGCTGGCGGTTTGGCTGGCTGAGCCCTTGGTGAAGATGAGGCTGATGGCTGATTTGGTTGAGAAGTGTAGGGTTTTGCGCGGTGGGGCAATGGTGGGGGCGATTCATTTGCATGCGCAGCATGGTGATCCGTTGGTCCATGAATTCATGAGGCGGTTGCTGCAGAGGGTGTGTTCTTCGCTGTTTGAGATGGTGAGGAGGTGGGTTTTGGAAGGGGAGTTGGAGGATATCTTTGCTGAGTTTTTCATTGTTGGGCGGCCTGTGAAGGTTGAGTCCCTCTGGAGAGAAGGGTATAGGCTTCATGATGCCATGCTTCCTTTGTTCATTTCGCCTTCTCTTGCGCAGAGGATATTGAGGACCGGCAAGTCGATTAATTTTCTTCGCGTTTGTTGTGAAGATCGTGGTTGGGCTGATGCTGCGACTGAGGTTGTTGCTGATCACGGAACAATGGCGAGAAGAGGTGGTTTTGGATATGGGGAAACGGATACCCTTGAGTTTTTGGTGGATGAAGCTTCAAAGAGGATTGATAAGCATTTGTTGGATGTGATTTTCAAGAGGTACAAGTTCAAAGAACATTGTCTTGCAATTAAGCAGTATTTGTTGCTTGGGCAAGGTGATTTTGTGCAGTATCTGATGGATATTGTTGGGCCTGAGCTTTCTGAGCCGGCTAACACTATAAGCTCTTTTAAACTTTCAGGACTGCTGGAAACTGCAATTCGGGCTTCTAATGCTCAGTATGATGATCCTGACATTTTGGATAGGCTCAGGGTTAAAATGATGCCACATGAAAGTGGTGATAGGGGCTGGGATGTATTTTCATTAGAATATGATGCTAGAGTTCCACTGGATACGGTGTTCACGGAATCTGTGATGACAAGGTATTTAAGAATTTTTAATTTTCTGTGGAAGCTTAGACGAGTGGAACATGCGCTTACTGGAGCCTGGAAGACCATGAAACCAAACTGCATTACCTCTAATTCCTTCACCAGATTGCAACATGCAGTAAAGATGCAGTTAGTTTCGACATTGAGGCGCTGTCAGGTTCTTTGGGTTGAAATCAATCACTTCATTTCAAACTTGCAATATTATATAATGTTTGAAGTGTTGGAGGTATCATGGTCAAATTTTTTGGCTGAGATGGAACTAGCCAAGGACCTTGATGATCTACTTGCTGCTCATGAAAAATATCTGCATTCTATTGTAGAGAAATCTCTCCTTGGAGAGCTTTCCCAGTCTCTTTACAAGTCACTATTTGTAATTTTTGATCTTATATTACGTTTTCGGAGCTGTGCAGATCGGTTGTATGAAGGTATTCATGAGTTGCAAGCTAGAATCACAGAATCTTCCATATCCTCTCGAGACCAGAATAAATCACGATCTCAAAAGCAACTAAGTGAAAAATCTGCAGAACAAGGATCCTGGATTGCTGATGGGAGGAAAGCCCTGACTCAACGAGCTGGTGAATTTCTACGAAATATGGAGCAAGATCTGGATGCAATTGCTAAGGAGTATTCGTCATTGCAAGAGGGATTCATTTCTCAGTTGCCTGTACAGCAGCATGTTGATCTAAAGTTTCTCTTTTTCCGTCTTGACTTCAACGAATTTTATAGGCGGTTGTGTCCTAGCATGTAG 2529 0.4753 MEEEEDQQKLPDLVKALVHHLLSLNLPPNSPPLNPNSPEFRNSLRYALRILSSRLTPSVAPDAAAIADSIKRRLASYGHSSQALSFADLFSKFASKAQSVDKKWALIYLLKIISEDRHNNTTATTLLPNLNFSEPATSNKPSNNGGVLLVSKDPENRRDIAFLEFVKLVREENEVSEEVLVQDVLYACQGVDGKFVKLDSESKRYVIPVSIRVPRAPRSMVYNLCELGVLFRKVSGYISRSMDRFPNEDVGTVGQAFCSALQDELSEYYKLLAVLEAQASNPIPLVSESASSRNYLSLRRLAVWLAEPLVKMRLMADLVEKCRVLRGGAMVGAIHLHAQHGDPLVHEFMRRLLQRVCSSLFEMVRRWVLEGELEDIFAEFFIVGRPVKVESLWREGYRLHDAMLPLFISPSLAQRILRTGKSINFLRVCCEDRGWADAATEVVADHGTMARRGGFGYGETDTLEFLVDEASKRIDKHLLDVIFKRYKFKEHCLAIKQYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMTRYLRIFNFLWKLRRVEHALTGAWKTMKPNCITSNSFTRLQHAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEVSWSNFLAEMELAKDLDDLLAAHEKYLHSIVEKSLLGELSQSLYKSLFVIFDLILRFRSCADRLYEGIHELQARITESSISSRDQNKSRSQKQLSEKSAEQGSWIADGRKALTQRAGEFLRNMEQDLDAIAKEYSSLQEGFISQLPVQQHVDLKFLFFRLDFNEFYRRLCPSM* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1243 842 Coils Coil 789 809 - -
Gso19g1243 842 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 32 830 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Gso19g1243 842 Coils Coil 258 278 - -
Gso19g1243 842 Pfam Gamma tubulin complex component C-terminal 490 835 IPR040457 GO:0043015
Gso19g1243 842 Gene3D - 489 834 IPR042241 -
Gso19g1243 842 MobiDBLite consensus disorder prediction 751 770 - -
Gso19g1243 842 Pfam Gamma tubulin complex component N-terminal 181 484 IPR041470 -
Gso19g1243 842 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 32 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1243 Gso-Chr19 40902060 40906603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1243 K16570 - gmx:100811956 1607.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1243 19 40902060 40906603 Gso3g1239 3 38033898 38037187 GST