Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1148 ATGGCTTCTAGCTTTCAAAGTTCACCAATGGCTTCCAACTACAGAAGCCATAATAAGAAAAGCCACGACAATGACATGTTCCATCCAACCCAAGTGGTGGTGGTTGTGGTGCCTTTCCCAGCACAAGGGCACCTCAACCAGCTTCTCAACCTCTCTCGCCTCATCTTGGCACACAACATACCCGTCCATTTTGTAGGTTCGCCCACCCACAATCGCCAAGTCATAGTTCGTGCCCAAGGTTGGGACCCAAACTTTATTTACAACATTCAGATTCACGACTTCAATGTTTCTCCTTTTGTTTCCCCTGCCCCCAACCCAAATGCTGAAACAAGGTTCCCCTCACATCTTTTACCCTCCTTTGAGGCCTCCACGAGTCTCCGAGTCCCCGTGTATGCACTCTTGCAATCCCTTTCATCTGTAGCCAGAAGGGTCGTTGTCATCTATGACTCCCTCATGGCATCTGTGGTGCAAGATGCTATTCATGTGCCCAATTGTGAGAGTTACACTTTCCACAGTGTTTCTGCCTTCACTATGTTCCTGTACTTTTGGGATGCAATGGGGAGACCCCCAGTAGAAAAAGTGTCCCACGTCATCCCTGAAGTTCCTTCCCTTGAAGGGTGCTTCACAACCCAATTCATAGATTTCATCACTTCACAGTATGAGTTCCACAAGTTCAGCAAAGGGACTATATACAACACCACAAGGGTAATTGAGAGTCCTTACTTGGAGTTAATAAAGAGGATCATTAGTAGCAAGACTCATTGGGCCTTGGGGCCCTTCAACCCTTTGTCCATTGAGAAGGGAGTCTATAACACAAAGCACTTCAGTGTTGAGTGGCTTGACAAGCAAGAAGCAGGATCAGTTTTGTATGTGTCGTTTGGGACAACAACATGCTTCTCTGAGGAGCAAATCAAGGAGGTTGCAAATGGGTTGGAAAAAAGCAAGCAAAAGTTCATATGGGTGGTGAGGGATGCTGACAAGGGAGATGTGTTCATTGAGGATGGTGTGAGAACTTCTGAGCTTCCAAAGGGGTTTGAAGAGAGAGTGAAAGGCACGGGGTTGGTTGTGAGAGACTGGGCACCCCAATTGGAGATTCTAAGCCACAGTTCAACTGGTGGGTTTATGAGTCACTGTGGATGGAACTCTTGCATGGAGAGCATCACAATGGGGGTGCCAATAGCAGCATGGCCTATGCACTCTGACCAGCCGAGGAACAGGGTTTTGGTGACCGAAGTGCTCAAGATTGGGGTGGTTGTGAAGGACTGGGACCACAGGGATGAGTTGGTGACAGCATCAGATGTTGAGAATGCCGTGAGGAGATTGATGGCAACAAAAGAAGGTGATGAGATGAGACAAAGGGCAATGAACCTAAAAAATGCTATTCGCAGGTCCAGGGATGAAGGGGGTGTTTCTCGCGTGGAACTGGATGATTTCATTGCGCACATCACTAGATAG 1455 0.4777 MASSFQSSPMASNYRSHNKKSHDNDMFHPTQVVVVVVPFPAQGHLNQLLNLSRLILAHNIPVHFVGSPTHNRQVIVRAQGWDPNFIYNIQIHDFNVSPFVSPAPNPNAETRFPSHLLPSFEASTSLRVPVYALLQSLSSVARRVVVIYDSLMASVVQDAIHVPNCESYTFHSVSAFTMFLYFWDAMGRPPVEKVSHVIPEVPSLEGCFTTQFIDFITSQYEFHKFSKGTIYNTTRVIESPYLELIKRIISSKTHWALGPFNPLSIEKGVYNTKHFSVEWLDKQEAGSVLYVSFGTTTCFSEEQIKEVANGLEKSKQKFIWVVRDADKGDVFIEDGVRTSELPKGFEERVKGTGLVVRDWAPQLEILSHSSTGGFMSHCGWNSCMESITMGVPIAAWPMHSDQPRNRVLVTEVLKIGVVVKDWDHRDELVTASDVENAVRRLMATKEGDEMRQRAMNLKNAIRRSRDEGGVSRVELDDFIAHITR* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1148 484 Coils Coil 447 467 - -
Gso19g1148 484 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 33 484 - -
Gso19g1148 484 CDD GT1_Gtf-like 38 463 IPR002213 GO:0008194
Gso19g1148 484 PANTHER GLYCOSYLTRANSFERASE 25 484 - -
Gso19g1148 484 MobiDBLite consensus disorder prediction 1 15 - -
Gso19g1148 484 PANTHER GLYCOSYLTRANSFERASE 25 484 - -
Gso19g1148 484 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 286 445 IPR002213 GO:0008194
Gso19g1148 484 Gene3D Glycogen Phosphorylase B; 274 466 - -
Gso19g1148 484 Gene3D Glycogen Phosphorylase B; 34 471 - -
Gso19g1148 484 MobiDBLite consensus disorder prediction 1 23 - -
Gso19g1148 484 ProSitePatterns UDP-glycosyltransferases signature. 359 402 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1148 Gso-Chr19 39709414 39711136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1148 31 483 Glycosyltransferase AT2G15490 30.000 3.40e-60 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1148 K13495 K13492 gmx:100783479 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1148 19 39709414 39711136 Gso3g1151 3 36889485 36891376 GST
Gso19g1148 19 39709414 39711136 Gso10g1002 10 25653777 25655384 PCT
Gso10g1002 10 25653777 25655384 Gso19g1148 19 39709414 39711136 PCT