Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1002 ATGCTGCCGTCCCTAATCAACATCCAACCCAAGAGGTACCTAAGTTCCCCAATGGCTTCGAATGAAAAAACCCTTCCTCATCAAACCCAAGTGGTTCTGATACCTTTCCCTGCACAAGGCCATCTCAATCAGCTTCTGCACCTCGCACGCCATATTTTTTCACACAACATACCAGTTCATTATGTTGGCACTGCCACACACATTCGCCAGGCCACACTTCGAGACCACAACTCCAATATTTCTAACATAATTATTCATTTCCATGCCTTTGAAGTTCCACCCTTTGTATCCCCTCCTCCCAACCCCAACAATGAAGAAACCGATTTCCCATCTCATCTACTTCCTTCATTTAAGGCCTCTTCGCATCTTCGCGAGCCTGTGAGGAATCTTCTTCAGTCCCTCTCATTTCAAGCCAAAAGGGTCATTGTCATCCATGACTCGTTAATGGCATCAGTGGCACAAGATGCCACAAACATGCCAAATGTTGAGAATTACACTTTTCACAGCACGTGTGCCTTTACCACCTTCCTTTATTATTGGGAGGTAATGGGAAGACCCCCGGTTGAAGGCTTCTTCCAAGCCACAGAAATTCCTTCTATGGGAGGATGCTTCCCACCCCAATTCATCCATTTCATTACTGAAGAGTATGAGTTCCATCAATTCAACGACGGCAACATTTACAACACAAGCAGGGCAATTGAAGGTCCTTACATAGAGTTTCTGGAGCGTATTGGTGGAAGCAAGAAGAGGCTTTGGGCACTGGGGCCTTTCAACCCTTTAACCATTGAGAAGAAAGATCCAAAAACAAGACACATATGCATAGAGTGGCTTGATAAACAAGAGGCGAATTCAGTCATGTATGTGTCTTTTGGGACAACAACAAGTTTTACAGTGGCACAATTTGAACAGATTGCAATTGGGTTGGAACAAAGCAAGCAGAAGTTCATCTGGGTGCTGAGAGATGCTGATAAAGGAAACATTTTTGATGGAAGTGAAGCAGAAAGGTATGAGCTTCCAAATGGGTTTGAGGAAAGAGTTGAAGGCATAGGGCTATTAATCAGAGACTGGGCACCCCAATTGGAAATTCTGAGCCACACTTCAACAGGGGGGTTTATGAGTCATTGTGGATGGAACTCTTGCTTAGAGAGCATAACCATGGGGGTGCCAATAGCAGCATGGCCTATGCACTCTGATCAACCAAGAAACTCAGTTTTGATCACAGAGGTGCTCAAGGTTGGGTTTGTTGTGAAGGATTGGGCACAAAGGAATGCATTGGTTAGTGCTTCAGTTGTTGAGAATGCTGTGAGAAGGTTGATGGAAACAAAGGAAGGTGATGAGATGCGAGACAGAGCAGTGAGGCTTAAAAATTGCATTCACAGGTCCAAATATGGAGGTGGAGTTTCTCGCATGGAAATGGGTTCTTTCATTGCTCACATCACTAAATAA 1446 0.4454 MLPSLINIQPKRYLSSPMASNEKTLPHQTQVVLIPFPAQGHLNQLLHLARHIFSHNIPVHYVGTATHIRQATLRDHNSNISNIIIHFHAFEVPPFVSPPPNPNNEETDFPSHLLPSFKASSHLREPVRNLLQSLSFQAKRVIVIHDSLMASVAQDATNMPNVENYTFHSTCAFTTFLYYWEVMGRPPVEGFFQATEIPSMGGCFPPQFIHFITEEYEFHQFNDGNIYNTSRAIEGPYIEFLERIGGSKKRLWALGPFNPLTIEKKDPKTRHICIEWLDKQEANSVMYVSFGTTTSFTVAQFEQIAIGLEQSKQKFIWVLRDADKGNIFDGSEAERYELPNGFEERVEGIGLLIRDWAPQLEILSHTSTGGFMSHCGWNSCLESITMGVPIAAWPMHSDQPRNSVLITEVLKVGFVVKDWAQRNALVSASVVENAVRRLMETKEGDEMRDRAVRLKNCIHRSKYGGGVSRMEMGSFIAHITK* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1002 481 CDD GT1_Gtf-like 31 455 IPR002213 GO:0008194
Gso10g1002 481 ProSitePatterns UDP-glycosyltransferases signature. 356 399 IPR035595 -
Gso10g1002 481 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 275 442 IPR002213 GO:0008194
Gso10g1002 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 31 480 - -
Gso10g1002 481 Gene3D Glycogen Phosphorylase B; 18 274 - -
Gso10g1002 481 PANTHER GLYCOSYLTRANSFERASE 21 481 - -
Gso10g1002 481 Gene3D Glycogen Phosphorylase B; 275 461 - -
Gso10g1002 481 PANTHER GLYCOSYLTRANSFERASE 21 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1002 Gso-Chr10 25653777 25655384 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1002 32 468 Glycosyltransferase AT2G36780 29.792 1.49e-59 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1002 K13495 K13492 gmx:100784697 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1148 19 39709414 39711136 Gso10g1002 10 25653777 25655384 PCT
Gso3g1151 3 36889485 36891376 Gso10g1002 10 25653777 25655384 PCT
Gso10g1002 10 25653777 25655384 Gso19g1148 19 39709414 39711136 PCT
Gso10g1002 10 25653777 25655384 Gso3g1151 3 36889485 36891376 PCT