Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1096 ATGATGGCGCTGCACTCAGTGTCTTCCGTTTCGCACGTGCTGCGCCTCGCCGAGCCATTCCCTTCCCTCCACAACGCTCACGTGCTCCTCGACCTCGCACCTCTCCGCCGCAAACCCAAGCGCCGCACTCGCAGACTCACGGCGTTTCCCTTGTCGTCGCCGCTCCGTCATTCCGCCGTCAAATCCGTTCTCCACCTCGACCGCTCCACCGACAACCGCCTCCATAATTCCTCTGCTTCGTCTTCTTCCGATTCCAAACCGCAGTCACTTGTTGCCCAGGTTGCAAACTTGGAGGACATAATATCAGAAAGAGGAGCCTGTGGGGTTGGATTCATTGCCAATTTGGAGAATAAGGAATCACATGAGATTGTCAAGGATGCTTTAAATGCTTTAAGTTGTATGGAACATCGTGGTGGCTGTGGAGCAGATAATGACTCTGGTGATGGTTCAGGGCTGATGACCGGAGTTCCGTGGGAACTATTTGACAATTGGGCCAACACGCAAGGGATTGCTTCCTTTGATAAGTTGCACACTGGTGTTGGAATGGTTTTCTTACCCAAAGATGCACAACTTCTCAATGAGGCGAAGAAAGTTATTGTAAATATTTTTCGGCAAGAAGGTCTTGAGGTTCTTGGTTGGAGGCCTGTCCCTGTAAATACTTCTGTAGTAGGTTTTTATGCGAAGGAGACCATGCCCAATATACAGCAGGTATTTGTTAAGATTGTGAAAGAAGAAAATGTTGATGACATTGAACGAGAACTGTACATCTGTCGGAAATTGATTGAAAAAGCAGTAAGCTCAGAAAGTTGGGGAAATGAGCTTTATTTCTGTTCTTTATCGAATCAAACCATAATTTACAAGGGGATGCTTCGCTCAGAAGTGCTTGGGTTATTTTATTCTGACCTCCAAAATGATCTTTATAAGTCCCCTTTTGCCATTTATCATCGAAGGTATAGCACAAATACTAGTCCCAGATGGCCTCTAGCACAACCGATGAGGCTTCTTGGTCATAATGGAGAGATCAACACCATACAGGGCAACTTGAATTGGATGCAATCACGAGAACCATCATTGAAGTCACCTGTATGGCGAGGTCGTGAAAATGAAATTCGTCCATTTGGAAATCCCAAGGGATCAGACTCAGCAAATCTTGACAGTGCTGCAGAATTATTGATAAGAAGTGGTCGAAGTCCTGAGGAAGCTATGATGATTCTTGTTCCAGAGGCTTATAAAAACCATCCAACTCTGTCAATCAAATATCCTGAGGTGGTTGACTTCTATGACTACTACAAGGGTCAGATGGAAGCTTGGGATGGACCAGCTTTGCTTTTGTTCAGTGATGGGAAAACTGTTGGTGCATGCCTTGATCGAAATGGACTTCGACCTGCTAGGTATTGGCGAACATCAGACAATATGGTCTATGTTGCCTCTGAGGTTGGTGTTGTGCCAGTGGATGAGTCAAAGGTTGTCTTGAAAGGCCGTTTAGGTCCAGGCATGATGATAACGGTTGATTTACTTGGCGGTCAGGTCTATGAGAATACAGAAGTTAAAAAACGAGTAGCCTTATCAAGCCCATATGGGAACTGGATCAAGGAAAATTTGCGGACTTTGAAGCTCGGGAACTTCCTTTCAGCCTCTGTGTTGGACAATGAGGCAGTATTAAGACACCAACAGGCATTTGGGTACTCTAGTGAAGATGTCCAGATGGTGATCGAGAGTATGGCTGCTCAAGGAAAGGAGCCCACGTTTTGCATGGGAGATGATATTCCATTGGCAGCATTGTCTCAGAAACCTCACATGCTTTTTGATTATTTCAAGCAACGGTTTGCACAGGTTACAAATCCTGCAATTGATCCTCTTCGAGAAGGATTGGTTATGTCTCTTGAAGTGAATATTGGGAAGAGAAGGAATATATTGGAAATTGGGCCAGAGAATGCTTCACAGGTTATGTTATCTAGTCCAGTATTGAATGAAGGGGAGCTTGAGTCATTACTAAAAGACTCCTACTTAAAACCACAAGTATTACCAACATTTTTTGATATAACTAAGGGCATTGAAGGTTCCTTGGAGAAAGCATTAAATAAGCTTTGTGAAGCTGCAGATGAAGCTGTTAGAAATGGTTCCCAGCTGCTTATTCTATCAGACCGTTCAGAAGCATTGGAACCAACTCATCCTGCAATTCCAATACTTCTTGCTGTTGGTACTGTTCATCAGCATCTAATCCAGAATGGCCTGCGAATGTCAGCTTCAATTATAGCAGATACTGCTCAGTGCTTTAGCACTCACCACTTTGCCTGTTTAATAGGATATGGTGCAAGTGCTGTGTGTCCGTACTTGGCATTGGAGACTTGTCGGCAGTGGCGTTTGAGCAATAAAACCGTAAATCTGATGAGGAATGGAAAGATGCCTACTGTATCAATTGAACAGGCACAGAAGAACTATTGCAAGGCTGTAAAAGCAGGCCTTCTTAAAATTCTTTCCAAAATGGGCATCTCGTTGCTATCAAGTTACTGTGGTGCACAAATATTTGAAGTCTATGGATTAGGGAAGGAAGTTGTTGATCTTGCATTCAGAGGAAGTGTGTCGAAAATTGGTGGATTAACTTTTGATGAGGTGGCAAGAGAGACTTTGTCTTTCTGGGTGAAGGCATTCTCTGAAGATACAGCTAAAAGGTTGGAAAATTTTGGATTTATACAGTTCAGACCAGGAGGGGAGTATCATGCAAATAACCCAGAAATGTCAAAGTTGCTCCACAAAGCTGTTCGTCAGAAAAGTCAAAGTGCCTTTTCAGTTTATCAGCAATATTTGGCTAATCGACCTGTGAATGTTCTCCGTGATCTTCTTGAATTCAAAAGTGATCGTGCTCCAATACCTGTGGGGAAGGTTGAACCTGCTTCATCTATTGTGCAACGGTTTTGCACAGGGGGCATGTCACTTGGAGCTATTTCCAGAGAAACCCATGAAGCAATTGCAATTGCCATGAACAGAATAGGTGGAAAATCAAATTCAGGGGAAGGTGGGGAGGATCCTATTCGCTGGAAACCACTTACAGATGTCGTAGATGGTTACTCTCCAACTCTTCCACACCTTAAAGGTCTTCAAAATGGGGATACTGCAACTAGTGCCATCAAGCAGGTTGCTTCTGGAAGGTTTGGTGTCACCCCAACATTCTTGGCAAATGCTGATCAGTTAGAAATTAAGATTGCACAAGGCGCAAAACCTGGTGAAGGTGGACAATTGCCTGGAAAAAAAGTTAGCATGTATATTGCTAGGTTGAGAAATTCTAAACCAGGAGTTCCTCTTATATCTCCACCTCCTCATCATGACATTTATTCTATCGAGGACCTTGCTCAGTTGATCTTTGATCTCCATCAGGTGAACCCTAAGGCCAAGGTGTCAGTAAAACTGGTGGCTGAAGCTGGAATTGGCACTGTTGCATCTGGGGTTGCAAAGGGCAATGCTGACATTATACAGATTTCAGGACATGATGGGGGAACAGGAGCAAGCCCTATAAGTTCCATCAAGCATGCTGGAGGTCCTTGGGAACTTGGGCTTACAGAATCTCACCAGACACTCATTGAAAATGGACTTAGAGAAAGGGTTATTCTCAGAGTTGATGGTGGGTTTAGAAGTGGAGTAGATGTCATGATGGCAGCAATAATGGGTGCTGATGAATATGGGTTTGGTTCAGTGGCAATGATTGCTACTGGATGTGTTATGGCCCGCATTTGCCACACCAATAATTGCCCAGTTGGTGTTGCCAGTCAGAGGGAAGAGTTGCGTGCACGCTTTCCTGGTGTTCCTGGGGATCTTGTCAACTACTTTGTGTATGTAGCTGAAGAGGTAAGAGGCATATTGGCACAGCTGGGGTATGAGAAGTTGGATGATGTGATTGGCCGGACTGATTTGTTCCAACCAAGAGACATATCTCTAGCAAAAACTCAGCATCTAGATCTGAGTTATATCCTCTCTAATGTTGGGTTACCTAAATGGAGCAGCACAGAAATTAGGAATCAGGAGCCTCATACCAATGGTCCTGTTCTGGATGATGTTTTGCTAGCAGACCCAGAGATTGCCTATGCCATTGAAAATGAAAAGGTGGTTAATAAGACCATAAAAATATACAACATTGATCGTGCTGCATGTGGACGTATAGCTGGTGTCATTGCAAAGAAGTACGGTGACACTGGTTTTGCTGGACAGTTGAATATAACATTTACAGGAAGTGCTGGGCAGTCATTTGCATGCTTTCTGACACCTGGAATGAACATTCGCCTTGTTGGAGAGGCTAATGATTATGTTGGGAAGGGCATTGCTGGAGGTGAGTTGGTTATCACTCCAGTTGACAAGACCGGTTTTGAACCTGAGGATGCAGCTATTGTAGGGAACACTTGCTTGTATGGTGCAACTGGTGGACAGGTCTTCGTTAGAGGGAGAGCAGGGGAAAGATTTGCTGTGAGAAACTCGCTTGCTGAAGCTGTGGTTGAAGGTGCAGGAGATCATTGTTGTGAGTACATGACTGGAGGCTGTGTGGTTGTCTTGGGAAAAGTGGGTAGAAATGTAGCTGCTGGAATGACTGGAGGATTGGCTTACTTTCTTGATGAGGACAATACTTTCATACCCAAGGTAAATGGAGAAATTGTAAAAATTCAACGGGTGTCAGCCCCTGTTGGGCAGATGCAACTGAAGAGCCTGATTGAAGCTCATGTTGAAAAAACCGGTAGTACAAAAGGTGCGGCTATTCTGAAGGACTGGGAGAAGTATTTATCACTATTTTGGCAGCTGGTTCCACCTAGTGAAGAGGATACCCCTGAGGCAAATGCCAAGTATGACACAACTACGGCAGATCAGGTCACTTATCAGTCTGCTTAG 4872 0.444 MMALHSVSSVSHVLRLAEPFPSLHNAHVLLDLAPLRRKPKRRTRRLTAFPLSSPLRHSAVKSVLHLDRSTDNRLHNSSASSSSDSKPQSLVAQVANLEDIISERGACGVGFIANLENKESHEIVKDALNALSCMEHRGGCGADNDSGDGSGLMTGVPWELFDNWANTQGIASFDKLHTGVGMVFLPKDAQLLNEAKKVIVNIFRQEGLEVLGWRPVPVNTSVVGFYAKETMPNIQQVFVKIVKEENVDDIERELYICRKLIEKAVSSESWGNELYFCSLSNQTIIYKGMLRSEVLGLFYSDLQNDLYKSPFAIYHRRYSTNTSPRWPLAQPMRLLGHNGEINTIQGNLNWMQSREPSLKSPVWRGRENEIRPFGNPKGSDSANLDSAAELLIRSGRSPEEAMMILVPEAYKNHPTLSIKYPEVVDFYDYYKGQMEAWDGPALLLFSDGKTVGACLDRNGLRPARYWRTSDNMVYVASEVGVVPVDESKVVLKGRLGPGMMITVDLLGGQVYENTEVKKRVALSSPYGNWIKENLRTLKLGNFLSASVLDNEAVLRHQQAFGYSSEDVQMVIESMAAQGKEPTFCMGDDIPLAALSQKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRRNILEIGPENASQVMLSSPVLNEGELESLLKDSYLKPQVLPTFFDITKGIEGSLEKALNKLCEAADEAVRNGSQLLILSDRSEALEPTHPAIPILLAVGTVHQHLIQNGLRMSASIIADTAQCFSTHHFACLIGYGASAVCPYLALETCRQWRLSNKTVNLMRNGKMPTVSIEQAQKNYCKAVKAGLLKILSKMGISLLSSYCGAQIFEVYGLGKEVVDLAFRGSVSKIGGLTFDEVARETLSFWVKAFSEDTAKRLENFGFIQFRPGGEYHANNPEMSKLLHKAVRQKSQSAFSVYQQYLANRPVNVLRDLLEFKSDRAPIPVGKVEPASSIVQRFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWKPLTDVVDGYSPTLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLANADQLEIKIAQGAKPGEGGQLPGKKVSMYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTESHQTLIENGLRERVILRVDGGFRSGVDVMMAAIMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNYFVYVAEEVRGILAQLGYEKLDDVIGRTDLFQPRDISLAKTQHLDLSYILSNVGLPKWSSTEIRNQEPHTNGPVLDDVLLADPEIAYAIENEKVVNKTIKIYNIDRAACGRIAGVIAKKYGDTGFAGQLNITFTGSAGQSFACFLTPGMNIRLVGEANDYVGKGIAGGELVITPVDKTGFEPEDAAIVGNTCLYGATGGQVFVRGRAGERFAVRNSLAEAVVEGAGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYFLDEDNTFIPKVNGEIVKIQRVSAPVGQMQLKSLIEAHVEKTGSTKGAAILKDWEKYLSLFWQLVPPSEEDTPEANAKYDTTTADQVTYQSA* 1624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1096 1623 CDD GltS 107 521 - -
Gso19g1096 1623 SUPERFAMILY FMN-linked oxidoreductases 550 1329 - -
Gso19g1096 1623 CDD GltS_FMN 910 1305 IPR002932 GO:0006537|GO:0015930|GO:0016638
Gso19g1096 1623 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 107 533 IPR029055 -
Gso19g1096 1623 Gene3D Aldolase class I 533 899 IPR013785 -
Gso19g1096 1623 PANTHER FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, CHLOROPLASTIC/MITOCHONDRIAL 79 1622 - -
Gso19g1096 1623 Gene3D - 1329 1604 IPR036485 GO:0016491
Gso19g1096 1623 Gene3D Aldolase class I 581 1307 IPR013785 -
Gso19g1096 1623 CDD gltB_C 1348 1598 IPR002489 GO:0016491
Gso19g1096 1623 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 107 506 IPR017932 -
Gso19g1096 1623 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 107 643 IPR029055 -
Gso19g1096 1623 Pfam Conserved region in glutamate synthase 907 1291 IPR002932 GO:0006537|GO:0015930|GO:0016638
Gso19g1096 1623 Pfam Glutamate synthase central domain 556 848 IPR006982 GO:0006807|GO:0015930
Gso19g1096 1623 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 79 1622 - -
Gso19g1096 1623 Pfam GXGXG motif 1373 1555 IPR002489 GO:0016491
Gso19g1096 1623 MobiDBLite consensus disorder prediction 1608 1623 - -
Gso19g1096 1623 Pfam Glutamine amidotransferases class-II 107 529 IPR017932 -
Gso19g1096 1623 MobiDBLite consensus disorder prediction 1600 1623 - -
Gso19g1096 1623 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1341 1604 IPR036485 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1096 Gso-Chr19 38987019 39024897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1096 K00284 - gmx:100809299 3197.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1096 19 38987019 39024897 Gso3g1101 3 36178942 36206682 GST