Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0986 ATGGGTGTTTCGGTTGATTCACCGTCACAAAAGGGTTCATGGGATTTCTTGAAGTTTTTAACTAGGAGGAAGCAGGTTGATTCTCCACGTAGGAACTCTCAGCCTCTGCTTGCCAGGGAGTTAACTGTGCTTCATCTCATTGCAGTTGGTGTTGGTTCAACAATTGGTGCTGGAGTGTATGTGCTGGTGGGAGCGGTTGCACGGGAGCATGCAGGACCGGCTTTGGCCATTTCTTTTCTGATTGCTGGATTAGCAGCTGGTCTCTCTGCATTTTGCTATGCAGAGTTGGCTAGTCGCTGCCCTTCTGCTGGAAGTGCATACCACTATACATACATTTGTCTTGGGGAAGGTGTTGCTTGGTTGATTGGCTGGTCTTTGTTATTGGAATATACAATTGGTAGTGCTGCAGTTGCTCGTGGCGTGACCCCCAATTTGGCTGCACTTTTTGGTGGTGCGGACAATTTACCCATATTTTTGGCCCGACAGCATATTCGTGGAATAGATATTGTTGTGGACCCATGTGCAGCAATCCTGGTATTACTTGTTACTGGACTCTTATGCGTGGGGATCAAGGAGAGTACAGTGGTACAAGGCATAGTGACAGCAGTGAATGTATGTGCATTGCTTTTTGTTATAGCAGCTGGTGGTTACTTGGGATTCAAGTCTGGATGGGTTGGATATGAACTTCCAATAGGATTTTTCCCCTTTGGGATTAATGGGATGCTGGCTGGTTCTGCTACAGTATTCTTTGCATATATTGGTTTTGATGCAGTTGCCAGTACTGCTGAAGAGGTTAAAAATCCTCAACGAGATTTACCCCTTGGTATTGGTGGTGCATTGTTTATTTGTTGTGGGATATATATGATGGTGTCCATTGTTTTAGTTGGTTTAGTACCTTATTATGCAATTGATCCAGATACCCCAATATCATCTGCATTTGCTAATCAAGGGATGGAATGGGCAGCTTACATTATAAATGCTGGTGCTTTCACAGCTCTCTGCTCAGCATTGTTGGGAGGGATACTTCCCCAGCCACGAATTCTGATGTCTATGGCAAGGGATGGGCTTCTGCCACCTTTTTTTTGTGATATAAATAAGCAGACTCAGGTTCCCGTTAAGGGCACAATAGCTACTGGCGTTGTGGCTTCATTCTTGGCTTTTTCTATGGAAGTCTCTCAACTAGCAGGAATGGTTAGTGTGGGTACGCTTTTAGCATTCACCATGGTGGCAATTTCTGTGTTGATCCTAAGATATATCCCTCCAGACGAAGTCCCATTGCCTCCATCTCTCCAGGATTCAATTGCTTCAGTGTTAAAGCGGTACAGATTGAGCAATGCAGAGACAAATGTGGAATATGCAGATGCAAATGTTGTTTCTTCTGAGTACAGAAAACCTTTAATTATTAAGGAGGATGTTTCAATTGATTTTCCTAAACATCTTGCTGTAGGAAACCATCTAAATGAAGGTGATAAGCGAAGAGTTGTTGGGTGGATCATAGCATTCATATGCTTAGGGGAGTTTGTCCTTATATATGCAGCTTCAGATTTTACTCTTCTTAGTTCTGTTCGCTTCGCATTATGTGGAATTGGCGGTGCTACTCTTCTGTGTGGTTTTGTTTTACTGACCTGTATAGATCAAGATGATGCAAGACATGACTTTGGGCACTCTGGAGGTTTCATTTGCCCATTTGTGCCACTGCTTCCCATAGCTTGCATTCTCATCAATTCCTACTTACTAGTTAATCTTGGAGATGGCACATGGTTCCGTGTTTCTATATGGCTGGCAACAGGACTACTAGTTTATGTGTTCTATGGCCGAACCCATAGCTCTCTAAAGGATGCAATTTATGTGCCAGCAAAGCAAGTGGATGAAATTTACCAGAATTACAGAAGCTGTCTTGCTTAA 1905 0.4341 MGVSVDSPSQKGSWDFLKFLTRRKQVDSPRRNSQPLLARELTVLHLIAVGVGSTIGAGVYVLVGAVAREHAGPALAISFLIAGLAAGLSAFCYAELASRCPSAGSAYHYTYICLGEGVAWLIGWSLLLEYTIGSAAVARGVTPNLAALFGGADNLPIFLARQHIRGIDIVVDPCAAILVLLVTGLLCVGIKESTVVQGIVTAVNVCALLFVIAAGGYLGFKSGWVGYELPIGFFPFGINGMLAGSATVFFAYIGFDAVASTAEEVKNPQRDLPLGIGGALFICCGIYMMVSIVLVGLVPYYAIDPDTPISSAFANQGMEWAAYIINAGAFTALCSALLGGILPQPRILMSMARDGLLPPFFCDINKQTQVPVKGTIATGVVASFLAFSMEVSQLAGMVSVGTLLAFTMVAISVLILRYIPPDEVPLPPSLQDSIASVLKRYRLSNAETNVEYADANVVSSEYRKPLIIKEDVSIDFPKHLAVGNHLNEGDKRRVVGWIIAFICLGEFVLIYAASDFTLLSSVRFALCGIGGATLLCGFVLLTCIDQDDARHDFGHSGGFICPFVPLLPIACILINSYLLVNLGDGTWFRVSIWLATGLLVYVFYGRTHSSLKDAIYVPAKQVDEIYQNYRSCLA* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0986 634 PANTHER PROTEIN, PUTATIVE-RELATED 10 625 - -
Gso19g0986 634 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 10 625 - -
Gso19g0986 634 Pfam Amino acid permease 42 423 IPR002293 GO:0016020|GO:0022857|GO:0055085
Gso19g0986 634 Pfam C-terminus of AA_permease 559 609 IPR029485 -
Gso19g0986 634 Gene3D Amino acid/polyamine transporter I 37 438 - -
Gso19g0986 634 Gene3D Amino acid/polyamine transporter I 475 624 - -
Gso19g0986 634 PIRSF AA_transporter 486 623 - -
Gso19g0986 634 PIRSF AA_transporter 18 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0986 Gso-Chr19 37153529 37161236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0986 17 634 Organic Solute Cotransporters AT5G36940 63.942 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0986 K13863 - gmx:100784895 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0298 16 3392928 3401063 Gso19g0986 19 37153529 37161236 PCT
Gso19g0986 19 37153529 37161236 Gso16g0298 16 3392928 3401063 PCT