Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0298 ATGATTGTGGAGGACGAAAATTGTGGTGTTGGTTCTGGGGAAGGAGGAAGATGGTTGCGGGGTTTCGGAAGCTTGATTAGGAGGAAGCAAGTTGATTCTGTTCATGTCAGGAGACATGGCCAATTGGCTAGGAAGTTGTCTGCTGTTGATCTCGTTGGAATTGGGGTTGGAGCTACCATAGGAGCTGGAGTGTATATTCTCATTGGAACAGTTGCTAGAGAGCAAGCAGGACCAGCACTTGTGATATCTCTTCTCATTGCTGGAATAGCTGCTGGACTGTCAGCTTTTTGCTATGCTGAGCTTGCATGTCGGTGTCCGTCTGCAGGGAGTGCTTATCATTATACATACATATGCATTGGAGAAGGGGTTGCTTGGTTGGTTGGTTGGTCTCTGATTTTAGAATATACTATTGGTGCTTCGGCTGTTGCTCGTGGCATAACCCCAAATCTGGCCTTGTTTTTTGGTGGAGAGGACAACCTACCTTCTTTTTTGGCTCGACATACCTTACCAGGTCTTGAAATTGTGGTTGATCCATGTGCAGCTGCATTAATTCTTCTTGTGACCCTACTTCTGTGCCTTGGAATCAAGGAGAGTTCAACGGCCCAATCCATTGTGACAACAGTAAATGTCTGTGTCATGCTTTTCATCATTTTAGGTGGTGGATATCTAGGTTTCAAGTCTGGATGGGTTGGATATGAACTCTCCACCAGGTATTTTCCTTATGGAGTAAATGGGATGTTTACTGGGTCTGCGATAGTTTTCTTTTCATACATTGGTTTTGATTCAGTGACCAGCACTGCTGAGGAGGTAAAAAATCCTCAACGAGACTTGCCAATTGGCATATCAATAGCGTTAACTATATGTTGCATTCTGTATATGCTTGTAGCAGCAGTTATTGTTGGCTTAGTACCATATTATGAGTTGAACTCTGATACCCCAATCTCCTCAGCATTTTCTAGCTATGGGATGCAATGGGCAGTGTATATAATAACAACTGGAGCTGTTACTGCTCTTTTTGCCAGTTTGCTGGGTTCTATTCTTCCTCAGCCACGTGTCTTTATGGCAATGGCTAGGGATGGTTTATTGCCTCATTTCTTCTCAGACATCCATAAAGGCACACAGATTCCTTTGAAAAGCACTATTGTCACTGGTGTCTTTGCAGCTACTCTTGCATTCTTTATGGATGTTTCCCAATTAGCAGGGATGGTTAGCGTGGGAACATTGCTTGCATTTACCACTGTTGCAGTTTCAGTTTTGATAATCAGATATGTTCCACCTGACGAGGTACCCGTTCTGTCTTCACTTCTAACATCTGTTGATCCATTATTGAGGCATTCTGGTGGTGATATTGGGGAAGATGGGGCCATAAGTCATGTAGATCCTTCTAGTTATTGTGAGAATAGTCACCTACATGACAAGTCAGAGGCTCTGATTGGGCATCCTTTAATCATAAAAGAAGTGACCAAAGATGAAGAGAATGAGAAAGCTAGGCGGAAACTTGCTTCATGGACCATAGCCCTATTATGTATTGGGATTCTCATAGTTACCAGTGCGGCTTCAGCTGACTGGTGTCCCAGGATTTTGCGCTTAACATTGTGTGGAATGGGTGGTATTCTTCTTTTGTGCAGTATAATTGTACTGGCCTGCATAAAGCAAGATGATAATAGGCACAGCTTTGGACACTCGGGAGGTTTTGCTTGCCCATTTGTTCCATTCTTACCTGCTGCCTGTATTCTTATAAACACCTACTTATTAATTGATCTTGGAGTTGGAACATGGCTGCGAGTTTCGGTATGGATGTTGATAGGAGTACTTGTATACTTGTTCTATGGCCGCAGTCACAGCTCACTGTTGCATGCAATCTATGTTCCTTCAGCATATGCTGATGAAATCCATCGTTCTCAAGCAATTCATCTTGCCTAG 1923 0.4332 MIVEDENCGVGSGEGGRWLRGFGSLIRRKQVDSVHVRRHGQLARKLSAVDLVGIGVGATIGAGVYILIGTVAREQAGPALVISLLIAGIAAGLSAFCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWSLILEYTIGASAVARGITPNLALFFGGEDNLPSFLARHTLPGLEIVVDPCAAALILLVTLLLCLGIKESSTAQSIVTTVNVCVMLFIILGGGYLGFKSGWVGYELSTRYFPYGVNGMFTGSAIVFFSYIGFDSVTSTAEEVKNPQRDLPIGISIALTICCILYMLVAAVIVGLVPYYELNSDTPISSAFSSYGMQWAVYIITTGAVTALFASLLGSILPQPRVFMAMARDGLLPHFFSDIHKGTQIPLKSTIVTGVFAATLAFFMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPDEVPVLSSLLTSVDPLLRHSGGDIGEDGAISHVDPSSYCENSHLHDKSEALIGHPLIIKEVTKDEENEKARRKLASWTIALLCIGILIVTSAASADWCPRILRLTLCGMGGILLLCSIIVLACIKQDDNRHSFGHSGGFACPFVPFLPAACILINTYLLIDLGVGTWLRVSVWMLIGVLVYLFYGRSHSSLLHAIYVPSAYADEIHRSQAIHLA* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0298 640 Gene3D Amino acid/polyamine transporter I 42 439 - -
Gso16g0298 640 Gene3D Amino acid/polyamine transporter I 487 624 - -
Gso16g0298 640 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 19 633 - -
Gso16g0298 640 PANTHER CATIONIC AMINO ACID TRANSPORTER 4, VACUOLAR 19 633 - -
Gso16g0298 640 Pfam C-terminus of AA_permease 565 615 IPR029485 -
Gso16g0298 640 PIRSF AA_transporter 491 624 - -
Gso16g0298 640 PIRSF AA_transporter 24 438 - -
Gso16g0298 640 Pfam Amino acid permease 46 428 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0298 Gso-Chr16 3392928 3401063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0298 22 640 Organic Solute Cotransporters AT3G03720 64.469 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0298 K13863 - gmx:100816704 1236.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0298 16 3392928 3401063 Gso19g0986 19 37153529 37161236 PCT
Gso19g0986 19 37153529 37161236 Gso16g0298 16 3392928 3401063 PCT