Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0969 ATGGAGAAGCAAACCTCGGAGCAATCACGTCGGGAACGAAGGAAAGAATCCCGCTTGGCAAAGAATGCATCAAAACATCAGTCCTGGCTACTCCACCAGAAATCTCGAGCTATGAAAAAACATGGCAACGATTCAGATTCTGAGTTAGAAACTAAAAGCAAATCCGACACATCAGTTAGTCCTAGTGTCAAGGAAGCACAAGTTGAGAAGTTTGAATCTTACTCTAGGAAATATGAGACAGATGAAGAATACATGTTGTCAGAGGAAGAACGGGGTGGTTCTGTTGCAAAGAAAAAGAAGAAAACGAAGGGTTCTAGCAAAAGTTCCGGGAAGAGCATGGTGGAGATGGGCATGCAGCTTGTTTCTATAGCCGCTGAAAAGGATCTAGAGCTTGAAAGGAAGCTTTCCAAGAAGCTCAAGGTGAAGGAAGGAAAATTGAGGGGAGTGGATGATGGGCTAAACATAATACTAGATGGAATGTCGTCAGCTTTTGATTTTATTATGGGAGAAGGGGAGGTTCCTGGTACTGGTGAATTGTCTGCGATGAGATTGAAGAAGAGCTTGTCGAGTAAGAAGGACAAGTTGTCAAATAAAAGAATCAAAGTGGAAGCAGTGGTTGCTGTATCAGGGCATGTAGAAACTTCTGATGAAGACATAGAATCGGATGATGTTCCTGATAGTGTGCCTTCAAGGAAGAAACATAAGAAAAGGAAAGTGTCTGGCCAACAGCAGAAAGACAATGTGGAGGATGATGGTGTTGGCATGTCCAAGCCTGTGGAATCTTGTGGAAAGGAGGTGAAATTGGGGGATGCTCCTGCTGAAGTTCCAGAAAAGAAAGCCAAAGAAAAATATATAGCGCCTCACTTGAGAGCTCGTGCTGGCAATGAACCTGAAGAGCATACTCAAATTCGAAGACGTGTGCGAGGCCTTCTTAACAGGCTTTCTGAATCTAATGTTGAGTCAATTACTGGGGAATTGTCCTTGATCTTTCAGTCTGTTGCTCGTAGTGTTGCTTCACAGATCTTGACCGAGGAAGTCTTGGCATCATGTTCTAGTGGTCCCCGTGGCAATCAACAGTATGCTGCTGTTTTTGCTGCATTTGTTGCTGGGATGGCATGTTTGGTCGGTGTTGACTTCAGTGCAAAGTTTGTGGCTTCCTTTGCAAAATGTTTTGAGGATGAGTACAATAAAGAAGACAATCTCTCCTTGCGGAATCTTATTCTTCTCTTATCCTATTTATGCATATTTGGAGTCTGTTCTAGTGATTTAATATATGACTTTCTGGTCATGGTGAGCAAGCGTTTAACTGAGGCAGATGTCTCTATCATTTTGACATTGTTACAATGTTGTGGGATGAAATTAAGGGCTGATGATCCAGCTGCCATGAAAGATTTCATTCTTAGTGTTCAGAATACATCAAATAAGTTGAAGGCTTCCTCTGAAGATGACAATGAAAAGAAAAATAGTAAAAGAATGGAGTTCATGCTTGAAATCATATGTGACATCAAGAATAACAAAAAGAAGCCAAATGAGGACTCTGCACATCACACTCGGATTAAGAAGTGGTTACGGAAGTTAAGAGTTGATGACATTTTGATTAGAGGGCTTAAATGGAGCAAATTACTTGATCCTGACAAGAAGGGCCAATGGTGGTTGTCTGGGGATGTGGCTTCTTCAACAGGTAATGTTGAAGAAGTTGCCAACAGAATAGACAAGGATGTTCTTGAAACCCAAAGAATGCTTCAGCTTGCCGCTGCTCAAAAGATGAACACAGATGCCAGAAGGGCAATCTTTTGTATAATAATGAGTGGGGAGGACTATCTTGATGCATTTGAGAAGCTTCTAAGATTGGAACTACCAGGCAAGCAGGACAGAGGTATCATGCGGGTTCTTGTGGAGTGTTGCTTGCAAGAGAAAGTTTTTAACAAGTATTATACAGTGTTGGCTTCCAAGTTATGCGAGCATGACAAAAATCATAAGTTTACTCTACAGTTTTGTCTGTGGGACCAGTTTAAGGATCTGGAGTCAATGCCGCTAATGAGGTCAATGCACCTTGCAAAATTTGTGGCTGAAATGGTTGCCTCTTTCACTCTATCCCTTTCTGTTCTGAAGACTGTCGATCTGAATGATATCACCCTATTGACACCAAAAAGGATCATGCATTTCCGCATTCTGTTTGAGGCCATTTTAGAGTATCCTGAAAACTTGGTATGGAATATCTTCACACGTGCAGCAGTGACCCCTGAACTTGAAAGTTTTAGGCAAGGCCTTGAGTTTTTCATAAAGGAGTATATTGTGAAAACCAATAAAGATCTAACTCAAAAGTTTAAGTTAGCAAAAAGGGCCCTCAACAATGTGGAAGGAATTTTAATGTGA 2376 0.4146 MEKQTSEQSRRERRKESRLAKNASKHQSWLLHQKSRAMKKHGNDSDSELETKSKSDTSVSPSVKEAQVEKFESYSRKYETDEEYMLSEEERGGSVAKKKKKTKGSSKSSGKSMVEMGMQLVSIAAEKDLELERKLSKKLKVKEGKLRGVDDGLNIILDGMSSAFDFIMGEGEVPGTGELSAMRLKKSLSSKKDKLSNKRIKVEAVVAVSGHVETSDEDIESDDVPDSVPSRKKHKKRKVSGQQQKDNVEDDGVGMSKPVESCGKEVKLGDAPAEVPEKKAKEKYIAPHLRARAGNEPEEHTQIRRRVRGLLNRLSESNVESITGELSLIFQSVARSVASQILTEEVLASCSSGPRGNQQYAAVFAAFVAGMACLVGVDFSAKFVASFAKCFEDEYNKEDNLSLRNLILLLSYLCIFGVCSSDLIYDFLVMVSKRLTEADVSIILTLLQCCGMKLRADDPAAMKDFILSVQNTSNKLKASSEDDNEKKNSKRMEFMLEIICDIKNNKKKPNEDSAHHTRIKKWLRKLRVDDILIRGLKWSKLLDPDKKGQWWLSGDVASSTGNVEEVANRIDKDVLETQRMLQLAAAQKMNTDARRAIFCIIMSGEDYLDAFEKLLRLELPGKQDRGIMRVLVECCLQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDQFKDLESMPLMRSMHLAKFVAEMVASFTLSLSVLKTVDLNDITLLTPKRIMHFRILFEAILEYPENLVWNIFTRAAVTPELESFRQGLEFFIKEYIVKTNKDLTQKFKLAKRALNNVEGILM* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0969 791 Gene3D - 272 547 - -
Gso19g0969 791 SMART if4_15 304 506 IPR003890 GO:0003723|GO:0005515
Gso19g0969 791 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 1 788 - -
Gso19g0969 791 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 1 788 - -
Gso19g0969 791 ProSiteProfiles MI domain profile. 592 708 IPR003891 -
Gso19g0969 791 SUPERFAMILY ARM repeat 297 508 IPR016024 -
Gso19g0969 791 MobiDBLite consensus disorder prediction 1 114 - -
Gso19g0969 791 MobiDBLite consensus disorder prediction 69 96 - -
Gso19g0969 791 SMART ma3_7 593 699 IPR003891 -
Gso19g0969 791 Pfam MIF4G domain 305 506 IPR003890 GO:0003723|GO:0005515
Gso19g0969 791 Pfam MA3 domain 594 695 IPR003891 -
Gso19g0969 791 MobiDBLite consensus disorder prediction 212 260 - -
Gso19g0969 791 MobiDBLite consensus disorder prediction 37 53 - -
Gso19g0969 791 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0969 Gso-Chr19 36884689 36892691 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0969 K17583 - gmx:100780608 1414.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0969 19 36884689 36892691 Gso16g0314 16 3573229 3581048 GST