LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso16g0314	ATGGAGAAGCAAACCTTGGAGAAATCGCGCCGGGAACGAAGGAAAGAATCCCGCTTGGCAAAGAATGCATCAAAACATCACTCCTGGCTCCTCCACCAGAAATCTCGAGCTTTGAAAAAACATGGCAACAATTCAGATTCAGAGTTAGAAACTAAAAGCAAATCCGACACATCAGTTAGTCCTAGTGTCAAGGAAACACAAATTGAGAAGTTGGAATCTTACTCTAGGAAACATGAGACAGATGAAGAATACATGTTGTCAGAGGAAGAACATGGTGGTTCTGTTGCAAAGAAAAAGAAGAAAACAAAGAAGGGTTTTTCTAACAAATGTTCCAGGAAGAGCATGGTGGAGATGATGGGCCTGCAGGATGTTTCTATAGCTGCCAAAAAGGATCTAGAACTTGAAAGGAAGCTTTCCAAGAAGCTCAAGGTGAAGGAAGGAAAATTGAGGGGACTGGATGATGGGCTGAACATAATACTCGATGGAATGTCGTCAGCTTTTGATTTCATGGGAGAAGGGGGGGTTCTTGGTACTGGTGAATTGTCCACGAAGAGATTGAAGAAGAGCTCATCGACTAAGAAGGACAAGTTTTCAAAGAAAAGAATGAAAGTGGAAGCAATGGATGATGTATCACGGCATGTAGAAACTTCTGAAGAAGACGTAGAATCGGATGATGTTCCTGATAGTGCACCTTCAAGGAAGAAAATTAAGAAAAGGAAATTGTCGGGTCAACAGCAGGAAGACAATGCGGAGGATGATGGTGTTGGCATATCCAAGCCTATGAAATCTTGTGGAATGGAAGCGGAATTGGGGGATGCTCCTGCTGAAGTTCCGGAAAAGAAAGCCAAAGAAAAATATATAGCGCCTCACTTGAGAGCTCGTGCAGGCAATGAACCTGAAGAGCATACTCAAATTCGAAGACGTGTGCGTGGCCTTCTTAATAGACTTTCTGAATCTAATGTTGAGTCAATTACTGGGGAATTGTCCTTGATCTTTCAGTCTGTTGCTCGTAGTGTTGCTACACAGATCTTGACTGAGGAAGTTTTGGCATCATGTTCTAGTGGTCCTCGTGGAAATCAACAGTATGCTGCTGTTTTTGCTGCATTTGTTGCTGGGATGGCATGCTTGGTCGGTGTTGACTTCAGTGCAAAGTTTATGGCTTCCTTTGCAAAATGCTTTGAGGATGAGTACAATAAAGAAGACAATCTCTCCTTGCGGAATCTTACTCTTCTCTTATCCTATTTATGCATATTTGGAGTCTGTTCTAGTGATTTAATATATGACTTTTTGGTCATGCTGAGCAAGCGTTTAACTGAGGCAGATGTATCTATCATTTTGGCATTGTTACAATGTTGTGGGATGAAAATAAGGGCTGATGATCCAGCTGCCATGAAAGATTTCATTCTTAGTATTCAGAATACATCAAATAAGTTGAAGGCTTCCTCTGGAGATGACAATGAAAAGCAAAATAGTAAAAGAATGGAGTTCATGCTTGAAATCGTATGTGACATCAAGAATAACAAAAGAAAGCCAAATGAGGACTCTGCACATCACACTCGGATTAAGAAGTGGTTACAAAAGTTGAGAGTTGATGACATTTTGATTAGAGGGTTTAAATGGAGCAAGTTACTTGATCCTGACAAGAAGGGCCAATGGTGGTTGTCTGGGGATGTGGCTTCTTCAACAGGTAATGTTGAAGAAGTTGCCAACAGAATAGACAAGGATGTTCATGAAACCCAAAGAATGCTTCAGCTCGCCGCTGCTCAAAAGATGAACACAGATGCCCGAAGGGCAATCTTTTGTATAATAATGAGTGGGGAGGACTATCTTGATGCATTTGAGAAGCTTCTAAGATTGGAGTTACCAGGCAAGCAGGACAGAGATATCATGCGGGTTCTTGTGGAGTGTTGCTTGCAAGAGAAAGTTTTTAACAAGTATTATACAGTGCTGGCTTCCAAGTTATGCGAGCATGACAAAAATCACAAGTTTACTCTACAGTTTTGCCTGTGGGACCAGTTTAAGGACCTGGAGTCAATGCCGCTAATGAGATCAATGCACCTTGCAAAATTTGTGGCTGAAATGGTTTCCTCTTTCACTCTCTCCCTTTCTGTTTTGAAGACTGTGGATCTGAATGATATCACCCTATTGACACCAAAAAGGATCATGCATTTCCGCATTCTGTTTGAGTCCATTTTAGAGTATCCTGAAAACCTGGTATGGAATATCTTCACACGTGCAGCAGTGACCCCTGAACTTGAAAGTTTTAGGCAAGGCCTTGAGTTTTTCATAAAGGAGTATATTGTGAAAAACAATAAAGATCTAAGTCAAAAGTTTAAGTTAGCAAAAAGGGCCCTTAATAATGTGGAAGGAATTTTGATGTGA	2382	0.411	MEKQTLEKSRRERRKESRLAKNASKHHSWLLHQKSRALKKHGNNSDSELETKSKSDTSVSPSVKETQIEKLESYSRKHETDEEYMLSEEEHGGSVAKKKKKTKKGFSNKCSRKSMVEMMGLQDVSIAAKKDLELERKLSKKLKVKEGKLRGLDDGLNIILDGMSSAFDFMGEGGVLGTGELSTKRLKKSSSTKKDKFSKKRMKVEAMDDVSRHVETSEEDVESDDVPDSAPSRKKIKKRKLSGQQQEDNAEDDGVGISKPMKSCGMEAELGDAPAEVPEKKAKEKYIAPHLRARAGNEPEEHTQIRRRVRGLLNRLSESNVESITGELSLIFQSVARSVATQILTEEVLASCSSGPRGNQQYAAVFAAFVAGMACLVGVDFSAKFMASFAKCFEDEYNKEDNLSLRNLTLLLSYLCIFGVCSSDLIYDFLVMLSKRLTEADVSIILALLQCCGMKIRADDPAAMKDFILSIQNTSNKLKASSGDDNEKQNSKRMEFMLEIVCDIKNNKRKPNEDSAHHTRIKKWLQKLRVDDILIRGFKWSKLLDPDKKGQWWLSGDVASSTGNVEEVANRIDKDVHETQRMLQLAAAQKMNTDARRAIFCIIMSGEDYLDAFEKLLRLELPGKQDRDIMRVLVECCLQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDQFKDLESMPLMRSMHLAKFVAEMVSSFTLSLSVLKTVDLNDITLLTPKRIMHFRILFESILEYPENLVWNIFTRAAVTPELESFRQGLEFFIKEYIVKNNKDLSQKFKLAKRALNNVEGILM*	794

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso16g0314	793	PANTHER	CELL CYCLE CONTROL PROTEIN CWF22-RELATED	1	790	-	-
	Gso16g0314	793	ProSiteProfiles	MI domain profile.	594	710	IPR003891	-
	Gso16g0314	793	Pfam	MIF4G domain	307	508	IPR003890	GO:0003723\|GO:0005515
	Gso16g0314	793	SUPERFAMILY	ARM repeat	299	510	IPR016024	-
	Gso16g0314	793	SMART	if4_15	306	508	IPR003890	GO:0003723\|GO:0005515
	Gso16g0314	793	MobiDBLite	consensus disorder prediction	1	107	-	-
	Gso16g0314	793	MobiDBLite	consensus disorder prediction	198	219	-	-
	Gso16g0314	793	MobiDBLite	consensus disorder prediction	1	23	-	-
	Gso16g0314	793	PANTHER	NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1	1	790	-	-
	Gso16g0314	793	MobiDBLite	consensus disorder prediction	69	96	-	-
	Gso16g0314	793	SMART	ma3_7	595	701	IPR003891	-
	Gso16g0314	793	MobiDBLite	consensus disorder prediction	39	53	-	-
	Gso16g0314	793	Pfam	MA3 domain	596	697	IPR003891	-
	Gso16g0314	793	Gene3D	-	274	551	-	-
	Gso16g0314	793	MobiDBLite	consensus disorder prediction	241	255	-	-
	Gso16g0314	793	MobiDBLite	consensus disorder prediction	182	258	-	-
	Gso16g0314	793	MobiDBLite	consensus disorder prediction	54	68	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso16g0314	Gso-Chr16	3573229	3581048	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso16g0314	K17583		-	gmx:100778579	1443.71

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso19g0969	19	36884689	36892691	Gso16g0314	16	3573229	3581048	GST