Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0965 ATGCAGACGAGGACTGTTCAAGTTAAGCAGCTTTCAGATCTAGCTGGTGTGAGAGAGATTCACGAGTTCTTCTCCTTTTCTGGAGAAATCGAGCATGTTGAGATCCTGAGTGAAGATGGGAAATCAAAGACTGCATATGTGACATTTAAAGATCCCAAAGCCCTTGAAATTGCATTATTGTTGTCGGGAGCAACAATAGTAGACCAGGTTGTGAAGATAACTCCAGCTGAGAACTATGTACCAAATCGTGAAATGGAGGAAGTAAGGGTGGTGGAAAATGCTATAAATGTTGCTCCTTCTGAGAATTCTGAGAATGTCTCCTTGAGTATTGAGGAGGGGAAAGCCAGCCCCACCAATAGAAGAATCTACCTTAGTAAAGCACAAGATGCAGTTACAAGTATGCTGGCAAAAGGTTCAGCAATAAGACAAGATGCAGTGAACAAAGCTAAAGCATTTGATGAAAAGCATCAGTTGACTGCCAATGCATCTGCAAAGGTCATTTCTTTGGACAAGAGAGTTGGACTCACGGAGAAATTGACAGTAGGCATTGCTGCAGTGAACCAGAAAGTCAAGTCCGTGGATCAGAGGCTTCAGGTTTCAGATAAGACAATGGCAGCAATAATTGCAGCTGAGAGGAAGATAAATAACACTGGATCAGCTGTCAAAACAAGCAGATATGTGACTGCTGGAACAGCATGGTTTAACGGTGCTTTTAGCAAGGTGGCAAAGGCTGGACATGTTGCAAGTACTAAAACTAGAGAAAAATTTCATTTGGCTGTTTCAAACTTGACAGCAAAGGAACCGTCAGTGGCTGCTGCATAG 822 0.427 MQTRTVQVKQLSDLAGVREIHEFFSFSGEIEHVEILSEDGKSKTAYVTFKDPKALEIALLLSGATIVDQVVKITPAENYVPNREMEEVRVVENAINVAPSENSENVSLSIEEGKASPTNRRIYLSKAQDAVTSMLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVISLDKRVGLTEKLTVGIAAVNQKVKSVDQRLQVSDKTMAAIIAAERKINNTGSAVKTSRYVTAGTAWFNGAFSKVAKAGHVASTKTREKFHLAVSNLTAKEPSVAAA* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0965 273 SUPERFAMILY RNA-binding domain, RBD 2 83 IPR035979 GO:0003676
Gso19g0965 273 PANTHER RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 1 272 - -
Gso19g0965 273 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Gso19g0965 273 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 69 IPR000504 GO:0003723
Gso19g0965 273 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 272 - -
Gso19g0965 273 SMART rrm1_1 5 74 IPR000504 GO:0003723
Gso19g0965 273 Gene3D - 1 90 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0965 Gso-Chr19 36849905 36853874 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0965 - - gmx:100779011 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0965 19 36849905 36853874 Gso16g0317 16 3600224 3604258 GST