Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0943 ATGAGACCCCCGAGAGGCGGTGGATTCAGAGGTGGCCGCGACGGTGGATTCAGAGGTGGCCGCGACGGTGGCGGTCGCGGCAGAGGTGGTTTTGGTCGCGGCGGAGGTGGTTTTGGTCGCGGAGGAGGTGGTTTTGGTCGCGGCGGCGGATTTCGCGACGAAGGACCACCCTCCGAAGTCGTAGAGGTGTCATCATTTATGCATGCATGCGAGGGAGACGCAGTGACAAAGCTTACAAATGAGAAAGTTCCCTTTTTCAATGCTCCTATATATCTGAAAAACATGACTCAGATTGGAAAAGTTGATGAAATATTTGGTCCCATCAATGAAGCTTACTTCTCAATTAAGATGATGGAAGGGATTGTTGCTACTTCTTATTCATCTGGCGACAAGTTTTATATTGATCCAAGGAAACTGTTGCCTCTTGCAAGATTTCTTCCACAACCCAAGGGACAATCAGCTGGTAGAGGTGGAGGTGGAGGAGGTCGTGGTGGAGGTAGAGGTGGCCGTGGAGGCGGTGGTTTTCGTGGAAGGGGCGGTCCAAGGGGTGGGAGAGGTGGTCCTCCTAGGGGTGGTGGTTTCAGGGGAAGGGGGAGATCATAG 603 0.5307 MRPPRGGGFRGGRDGGFRGGRDGGGRGRGGFGRGGGGFGRGGGGFGRGGGFRDEGPPSEVVEVSSFMHACEGDAVTKLTNEKVPFFNAPIYLKNMTQIGKVDEIFGPINEAYFSIKMMEGIVATSYSSGDKFYIDPRKLLPLARFLPQPKGQSAGRGGGGGGRGGGRGGRGGGGFRGRGGPRGGRGGPPRGGGFRGRGRS* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0943 200 Gene3D Probable tRNA pseudouridine synthase domain 56 147 IPR038664 -
Gso19g0943 200 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 1 199 - -
Gso19g0943 200 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 199 - -
Gso19g0943 200 MobiDBLite consensus disorder prediction 1 58 - -
Gso19g0943 200 SUPERFAMILY Translation proteins 61 135 IPR009000 -
Gso19g0943 200 MobiDBLite consensus disorder prediction 147 200 - -
Gso19g0943 200 Pfam Gar1/Naf1 RNA binding region 60 146 IPR007504 GO:0001522|GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0943 Gso-Chr19 36494175 36496314 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0943 K11128 - gmx:100788981 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0943 19 36494175 36496314 Gso16g0337 16 3828463 3830618 GST