Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0337 ATGAGACCCCCGAGAGGCGGTGGACGCGGCGGCGGATTCAGAGGTGGCCGCGACGGTGGTGGTCGCGGCAGAGGTGGTTTTGGTCGCGGCGGAGGTGGTTTTGGTCGCGGCGGCGGCGGCGGATATCGTGACGAAGGACCACCCTCCGAAGTCGTAGAGGTGTCATCTTTTATGCATGCATGCGAGGGAGATGCAGTGACAAAGCTTACAAATGAGAAAGTTCCCTTTTTCAATGCTCCTATTTATCTGAAAAACATGACTCAGATTGGGAAAGTTGATGAAATATTTGGCCCCATCAATGAAGCTTACTTCTCAATTAAGATGATGGAAGGGATTGTTGCTACTTCTTATTCATCCGGCGACAAGTTTTATATTGATCCAAGGAAACTGTTGCCTCTTGCAAGATTTCTTCCACAACCCAAGGGACAATCAGCTGGTAGAGGTGGTGGTGGAGGTGGTCGTGGTGGATTTAGAGGTGGCCGTGGAGGTGGTGGTTTTCGTGGAAGGGGGGCTCCAAGGGGTGGGAGAGGTGGTCCTCCCAGGGGTGGTGGACGAGGTGGTGGTTTCAGGGGAAGGGGGAGATCATAG 588 0.534 MRPPRGGGRGGGFRGGRDGGGRGRGGFGRGGGGFGRGGGGGYRDEGPPSEVVEVSSFMHACEGDAVTKLTNEKVPFFNAPIYLKNMTQIGKVDEIFGPINEAYFSIKMMEGIVATSYSSGDKFYIDPRKLLPLARFLPQPKGQSAGRGGGGGGRGGFRGGRGGGGFRGRGAPRGGRGGPPRGGGRGGGFRGRGRS* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0337 195 Gene3D Probable tRNA pseudouridine synthase domain 47 138 IPR038664 -
Gso16g0337 195 Pfam Gar1/Naf1 RNA binding region 51 137 IPR007504 GO:0001522|GO:0042254
Gso16g0337 195 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 194 - -
Gso16g0337 195 SUPERFAMILY Translation proteins 52 126 IPR009000 -
Gso16g0337 195 MobiDBLite consensus disorder prediction 138 195 - -
Gso16g0337 195 MobiDBLite consensus disorder prediction 1 48 - -
Gso16g0337 195 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 1 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0337 Gso-Chr16 3828463 3830618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0337 K11128 - gmx:100799823 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0943 19 36494175 36496314 Gso16g0337 16 3828463 3830618 GST