Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0942 ATGGCAGCTGTTGCTCCTTCTTCTGACAAAACTGCAGATTTATTGCAGAATTTGACTCTGGACTCTGAGTCCAAAGCCATTGGAGTTGCTGAGCCTGCGAAGAAGAATGGACCTGCTTTTTCCAATGGGGCAGCTAAAGGGAGGGCCAAGCCATTCAATCCAAATTCATGCTTTGTTCCAAATGGATACCCATCTGCGTATTATTATGGAGGTTATGATGGGCAAGGTGATTGGAATGCTTATTCCAGATATATGAACCTTGATGGAGGGATGGCTCAAGGTGTTTATGGGGATAGCTGCTCTTACATGTACCATCAAGGTTATGGTTATACACCATATGGAACATATGCACCGCCCAATTCGTCTTCTCCAATGATTCAACAAGATGGCCAGCATTATGGGCTGCAACAGTACCACTTGCCAGCTTATGCTTCTTTGTCAGGCTATCAGGGTCCAAGAAGCACCCATGGTACACAGCTTCCAGTCCCTTCAGATGTGTCCTTAGTATCTGATAGACAGTCCAAACATGGAGCCAAGGTTGGCTTATCTTCATCAGTAGTGCCTGTGAAAGATTTTACATCTCAAAGGAATCAAAGACTTCCTCAGCCACTTCCACAATACGTGAGCATGAGTGGTTCCAGACATCCATCTGGACTTGACCTGGTTTCTGGATTCATGAATGGGATGTATCCAAGCAACAGGATGTACAGCCAATATGGAAACACATTTAGGCCTGATTCTCGTTTTGGATCTGCTGGGTATGGATCTAGAATGGGCTCTTTCGATAGCAAATTTAATGGCACAGGGTATGGCTGCGGTTTAAAAAAAAGCATGGATGGTTTCAGCGAGCTAAATAAGGGACCCAGAGCTGCCAAGAGTTCTGATAATAAAAATATCAAAAGTCTTGGACCTGTCACATTATTACTCAAAGGACAGAACCTTCCAGTGAAGAGTGATAACAAAGAAGTTCCTCCAGTTCCTGACAAGGAACAGTACAATGGGAAAGATTTTGCTGAGAATTATTCTGATGCAAAGTTTTTTGTCATCAAATCCTATAGTGAGGATGATATTCATAAAAGCATAAAATATAGCGCATGGGCAAGCACCCCTAACGGCAATAAAAAGCTGGATGCAGCATATCAGGAAGCCAAGGAGAAGCCCGGTGGCTGTCCCATATTTTTGTTATTTTCGGTCAACACTAGTGGGCAGTTTGTTGGTTTAGCAGAGATGTTGGGTCCTGTTGATTTTGGTAAAACTGTAGATTATTGGCAGCAGGACAGGTGGACTGGTTGTTTTTCTGTGAAGTGGCACGTCATAAAGGATATTCCAAATAGCGTGTTGAGGCACATAACGCTTGAAAACAATGAAAACAAACCTGTAACAAATAGCAGGGATACTCAGGAGGTTAAGTTTGAGAAGGGTGTTCAAATTGTCAAAATTTTCAAGGAGCATTCAAGCCAAACATGCATCTTGGATGATTTTGGGTTCTATGAGGCTCGTGAAAAGGCGACTCAGGAGAAAAAGTCCAAGGAACAGCAGTTACCAAAACAGGTCAGCAAGCCCAGTGATTTCACATTTGGGACAGTTACATTTCCAAAGTCTCTTGATGCAACCTTGATGAATGAAGCTGCTACTGCAAATGCAGCAGAGGGAAGAATGAATGCAGAAGGGCTGGTAGAAGGGAATGGATCGACCCCAACACTTGGAGATTCTTCCAAGAGCTGTTAA 1728 0.4329 MAAVAPSSDKTADLLQNLTLDSESKAIGVAEPAKKNGPAFSNGAAKGRAKPFNPNSCFVPNGYPSAYYYGGYDGQGDWNAYSRYMNLDGGMAQGVYGDSCSYMYHQGYGYTPYGTYAPPNSSSPMIQQDGQHYGLQQYHLPAYASLSGYQGPRSTHGTQLPVPSDVSLVSDRQSKHGAKVGLSSSVVPVKDFTSQRNQRLPQPLPQYVSMSGSRHPSGLDLVSGFMNGMYPSNRMYSQYGNTFRPDSRFGSAGYGSRMGSFDSKFNGTGYGCGLKKSMDGFSELNKGPRAAKSSDNKNIKSLGPVTLLLKGQNLPVKSDNKEVPPVPDKEQYNGKDFAENYSDAKFFVIKSYSEDDIHKSIKYSAWASTPNGNKKLDAAYQEAKEKPGGCPIFLLFSVNTSGQFVGLAEMLGPVDFGKTVDYWQQDRWTGCFSVKWHVIKDIPNSVLRHITLENNENKPVTNSRDTQEVKFEKGVQIVKIFKEHSSQTCILDDFGFYEAREKATQEKKSKEQQLPKQVSKPSDFTFGTVTFPKSLDATLMNEAATANAAEGRMNAEGLVEGNGSTPTLGDSSKSC* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0942 575 ProSiteProfiles YTH domain profile. 344 481 IPR007275 GO:0003723
Gso19g0942 575 MobiDBLite consensus disorder prediction 560 575 - -
Gso19g0942 575 MobiDBLite consensus disorder prediction 554 575 - -
Gso19g0942 575 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 141 IPR045168 -
Gso19g0942 575 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 140 575 IPR045168 -
Gso19g0942 575 Gene3D ph1033 like domains 326 495 - -
Gso19g0942 575 MobiDBLite consensus disorder prediction 26 46 - -
Gso19g0942 575 Pfam YT521-B-like domain 344 482 IPR007275 GO:0003723
Gso19g0942 575 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 140 575 - -
Gso19g0942 575 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0942 Gso-Chr19 36445899 36449918 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0942 - K20102 gmx:100818027 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0942 19 36445899 36449918 Gso16g0339 16 3852678 3856978 GST