Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0339 ATGGCAGCTGTTGCTCCTTCTTCTGACAAAACTGCAGATTTATTGCAGAATTTGACCCTGGACTCTGAGTCCAAACCCATTGGAGTTGCTGAGCCTGCGAAGAAGAATGGACCCACTTTTTCCAGTGGTGCAGCTAAAGGGAGGGCCAAGCCATTCAATCCAAATTCATGCTTTGTTCCAAATGGATACCCTTCTGCGTATTATTATGGAGGTTATGATGGGCAAGGTGATTGGAATGCTTATTCCAGATATATGAACCTTGATGGAGGGATGGCTCAAGGTGTTTATGGGGATAACTGCTCTTATATGTACCATCAAGGTTATGGTTATGCACCATATGGAACATATGCATCTCCCAATTCCTCTTCTCCGATGATTCAACAGGATGGTCAGCAGTACGGGCTGCAACAGTACCAGTATCCATGTTCTTATTACAAATCTCCAGCTTCTGCTGATGTGTCATTTACTACCAACAAAATCAGTCTTCCAGAAGGAGAAATATCAACTACTGTTGATGTTGCTGATTGTGTTTCTTCAACAAATGCTATGAATAAAGGAAACAATGTTAACGTGGGCAATAGTAATTTCACTGATAAAAATGGGTTAAATCCATTTTTAACTAGTTCACAGCACACATCTTTGAATACAAATGATTCTTATCAAGGGGCTAGCTTGCCAGCTTATGCTCCTTTGTCAGGATATCAGGGTCCAAGAAGCACCCATGGTACACAACTGCCAGTCCCTTCGGATGCGTCCTTAGTATCTGACGGACAGGCCAAATATGGAGCCAAGGTTGGATTATCTTCATCAGTAGTGCCTGTCAAAGATTTTTCATCTCAAAGAAATCAAAGACTTCCTCAGCCACTTCCCCAATACTCAAACATGAGTGGTTCCAGACATCCTTCTGGACTTGACCTGGTTTCTGGATTCATGAACGGGATGTATCCGAGCAACAGGATGTACAGCCAATATGGAAACACATTCAGGCCTAATTCTCATTTCGGATCTGCTGCGTATGGATCTAGAATGGGCTCTTTCGATAGCAAACATAATGGTGCAGGGTATGGCTGCGGTCTTAACCATTTTAAAAAAAGTATGGATGGTTTCAGCGAGCTAAATAAGGGACCCAGAGCTGCCAAGAGTTCTGATAATAAAAACATCAAAAGTCTTGGACCTGTCACATTATTACACAAGGGACAGAACCTTTCAGTGAAGAGTGACAACAAAGAAGTTCCTTTGGTTCCCGACAAGGAACAGTACAATGGGAAAGATTTGGCTGAGAATTATTCTGATGCCAAGTTTTTTGTCATCAAATCCTATAGTGAGGATGATATTCATAAAAGCATAAAATACAGCGCTTGGGCAAGCACCCCTAACGGCAACAAAAAGCTGGATTCGGCATATCAGGAAGCCAAGGAGAAGCCCGGTGGCTGTCCCATATTTTTGTTATTTTCGGTCAACACTAGTGGGCAATTTGTTGGTTTAGCCGAGATGTTGGGTCCTGTTGATTTTGGTAAAACCGTAGATTATTGGCAGCAGGACAGGTGGACTGGTTGCTTTTCTGTGAAGTGGCATGTCATCAAGGATATCCCAAATAGCGTGTTGAGGCACATAACGCTTGAAAACAATGAAAACAAACCTGTAACAAATAGTAGGGATACTCAGGAGGTTAAGTTTGAGAAGGGTGTTCAACTTGTCAAAATATTCAAGGAGCATTCAAGCCAAACATGCATCTTGGATGATTTTGGGTTCTACGAGGATCGTGAAAAGGTGACTCAGGAGAAAAAGTCTAAGGAACAGCAGTTACCAAAACAGATCAGCAAGCCCAGTGATTTCACATTTGGGACGGTTACATTTCCGAAGTCTCTTGATGCAACCTTGATCAATGAATCTGCTACTGCAAATGCAGCAGATGGAAGAATGAATGCAGAAGGGCTGTTAGAAGGGAATGGATCGACTACAGCACTTGAAGATGCTTCTAAGAGCTGTTAA 1992 0.4242 MAAVAPSSDKTADLLQNLTLDSESKPIGVAEPAKKNGPTFSSGAAKGRAKPFNPNSCFVPNGYPSAYYYGGYDGQGDWNAYSRYMNLDGGMAQGVYGDNCSYMYHQGYGYAPYGTYASPNSSSPMIQQDGQQYGLQQYQYPCSYYKSPASADVSFTTNKISLPEGEISTTVDVADCVSSTNAMNKGNNVNVGNSNFTDKNGLNPFLTSSQHTSLNTNDSYQGASLPAYAPLSGYQGPRSTHGTQLPVPSDASLVSDGQAKYGAKVGLSSSVVPVKDFSSQRNQRLPQPLPQYSNMSGSRHPSGLDLVSGFMNGMYPSNRMYSQYGNTFRPNSHFGSAAYGSRMGSFDSKHNGAGYGCGLNHFKKSMDGFSELNKGPRAAKSSDNKNIKSLGPVTLLHKGQNLSVKSDNKEVPLVPDKEQYNGKDLAENYSDAKFFVIKSYSEDDIHKSIKYSAWASTPNGNKKLDSAYQEAKEKPGGCPIFLLFSVNTSGQFVGLAEMLGPVDFGKTVDYWQQDRWTGCFSVKWHVIKDIPNSVLRHITLENNENKPVTNSRDTQEVKFEKGVQLVKIFKEHSSQTCILDDFGFYEDREKVTQEKKSKEQQLPKQISKPSDFTFGTVTFPKSLDATLINESATANAADGRMNAEGLLEGNGSTTALEDASKSC* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0339 663 ProSiteProfiles YTH domain profile. 432 569 IPR007275 GO:0003723
Gso16g0339 663 Pfam YT521-B-like domain 432 570 IPR007275 GO:0003723
Gso16g0339 663 MobiDBLite consensus disorder prediction 277 298 - -
Gso16g0339 663 MobiDBLite consensus disorder prediction 231 253 - -
Gso16g0339 663 MobiDBLite consensus disorder prediction 23 48 - -
Gso16g0339 663 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 1 663 - -
Gso16g0339 663 MobiDBLite consensus disorder prediction 236 251 - -
Gso16g0339 663 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 663 IPR045168 -
Gso16g0339 663 Gene3D ph1033 like domains 414 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0339 Gso-Chr16 3852678 3856978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0339 - K20102 gmx:100803547 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0942 19 36445899 36449918 Gso16g0339 16 3852678 3856978 GST