Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0939 ATGGCAATTGCACGCACTGGAGTCTACGTCGACGACTATTTGGAGTACGCGAGCACATTACCCGCTGAACTTCAGAGACTGCTCAACACTGTCCGGGAACTTGATGATCGATCCCAATCTATGATAACGCAGACCAGGCAGCAGACGAAGTACACTATGGGGTTCTCATCACATGGCTCCAAGAAGGGTAATCACAGTTATAATAACAATTATGGGAATGAGGACGATGATGCAGCTATTGAGAAAATGCGGAAAGAAATCGAGGTGAATCAGGATAGTGCATTGAGTCTTTGTACTGAGAAGGTTTTGTTGGCACGACAAGCATATGACTTGATAGATAGCCATATAAAACGACTTGATGAGGATTTAAACAACTTTGCTGAAGATTTAAAGCAAGAGGGTAAAATAGCACCAGATGAACCAGCAATTCTGCCCCCATTGCCTATAGTCCCTAAAGCTGAAAAGCGCAAGCCCATATATATAACTCCTCAATCAAAGAGAATTGATTACAGGGAAAGAGATTGGGATAGGGAGCGTGATAGGGACTTCGAGCTAATGCCTCCACCAGGAAGTCATAAAAAGGAGTATGCTACCCCGATGGATGTTGATCAGCCCATTGATCCAAATGAACCTACATACTGTGTTTGTCATCAGGTATCTTTTGGAGACATGATTGCTTGTGACAATGAAAATTGCCAAGGAGGTGAATGGTTCCACTATTCATGTGTTGGGCTAACACAAGAGACAAGATTCAAGGGAAAGTGGTACTGTCCTACTTGCATATTACTCCCACAATGTCAACGATGA 807 0.4325 MAIARTGVYVDDYLEYASTLPAELQRLLNTVRELDDRSQSMITQTRQQTKYTMGFSSHGSKKGNHSYNNNYGNEDDDAAIEKMRKEIEVNQDSALSLCTEKVLLARQAYDLIDSHIKRLDEDLNNFAEDLKQEGKIAPDEPAILPPLPIVPKAEKRKPIYITPQSKRIDYRERDWDRERDRDFELMPPPGSHKKEYATPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLTQETRFKGKWYCPTCILLPQCQR* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0939 268 PANTHER PHD FINGER PROTEIN ING2 2 263 - -
Gso19g0939 268 SUPERFAMILY FYVE/PHD zinc finger 188 261 IPR011011 -
Gso19g0939 268 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 262 IPR013083 -
Gso19g0939 268 ProSiteProfiles Zinc finger PHD-type profile. 211 263 IPR019787 -
Gso19g0939 268 SMART ING_2 9 126 IPR024610 -
Gso19g0939 268 SMART PHD_3 213 261 IPR001965 -
Gso19g0939 268 Gene3D - 5 124 - -
Gso19g0939 268 MobiDBLite consensus disorder prediction 38 71 - -
Gso19g0939 268 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 126 IPR024610 -
Gso19g0939 268 CDD ING_plant 17 123 - -
Gso19g0939 268 CDD PHD_ING 213 260 - -
Gso19g0939 268 PANTHER INHIBITOR OF GROWTH PROTEIN 2 263 IPR028651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0939 Gso-Chr19 36420931 36424687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0939 K11346 - gmx:100787916 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0939 19 36420931 36424687 Gso16g0342 16 3869245 3873513 GST