Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0905 ATGGATCATGAGATAAAAGAGCCACCACCTCTCTCATCCACACTCTGTTCTCAACCCTCTCAATTCAGTCAAAACACTCAAGAAACTTATCCCCGTTACTTCCAACAAGACTTGAACGAAAGAAAGAAAAAAGGCACGTGCTTCACGTGCGGCCAGAAGGATCACTGGTACCGGGAGTGTCCCTTCAAATCCTCTAATAACGATTCCCAAAATGCCAACAGCATATGGTGCCGCTGTGGCCATGGCCGTTGCGAAAAGAGAACCTCAAAGAGTGAGAAAAACCCCGGCAGGATGTACTACGTTTGCCCCATCAAAAGGGGGGAAAAATGTACTAACGGTTTTGTTAAATGGTGCGATGATCCCGATGTCGAGAGTGATTGGTCGCAGCCTCCGCCGTTTAAGTATCCTGAGTGTAAGTGTCCTGCTGGAGTGTGTAAAAGGGAGAAGGCAACACATAATGGCGTTGTTAAATACTATTTTACTTGCCCCGTTAAAGAGGGCCATGGAAATTGCGGTTACAAGGTATGGGAGGATGAGCTGCTACATAAAAGAACTAATGATCAAGATGACCATGACTTCGATGAGGGTGTTAATTTGGCAGTAAATCATTCCAAAAAGATGAGAATCATGGACAGTTCCGAGGAGGATCCAACACCAATGGCTGTATCCGAGGCTGAGCTTTCACAGAGTGAAGATGAAGCACTCGAGAAAGCATCGCAGCTATCTTGCCTATCAGAATCAACACCTTCAAGGATCGGTGGGGATCGACAGCATGTGTTTCCAAGGCACATTTTTGCTGGTGCTGGTGCTGGCGCTGGCGCTGATCCATCATTTGCTCCATTAGGTTGGTTAGGTCGCCTTCTCTTCAGTCCACCACAAAGCTTGAAATCCCCCTCATCTCAGACACCTCAGTCAATTTTCTGCTGTGTTTTCCCATCCTTTAATCCCATTGATGTCCCAAAACAACCAAGTATTACTAATGTTCCTTGTGCTGAACATAACCAGCTTGATGTTATTCGTCTCAGCCAACAAAGCCAACTTTCAAGCAGTGAAAGAAAACTAATGTCAAGGGCACAAAGGCAAAGACAATTGGCCTTTGCTGCACAAAAGCAGCTCCTCAATGATCTAGAAACCTCGAAGCCTCACGAGCATGAGTCCATGAAAGAGGCAGCACAAGACACTTTTGCTATATTAAACAACTTGGGTGCAAATGACACACAATTCTTTGAGCATGTTTTGGATTTCATAAAACTCACATCATCGGTTGTACAAATGACTAAATCCATCGAATGTCTTGAGGAGGACAACAAGCGTCTTGAGGACGAGAATGCCAAACTCGCCCACATTCGTGACCTCTACGCCAAGACCGAAGATCAGTTCCAAGCCTCTGATCAACGAAGGCAATTACTTTCCAAAGAGATCTCTGACTTTGAGGCCATGCTTGTTGAGAAACGAAACCAATTGAAGTCGTGTGAATTGGAAACTTCAAACATGCGAATCGAACTTGGTGGTTTGAGAAGAACTATGTTGGAAGCTGATACAGCCTTGAAGGCTAGAATGAAGCAAGCAGAGATTGCAGGTAAACTTAGGAAAGAGAGAGAAGCCAAACAAATTGCAGCCAAAACAGCACTCGAGAAGGCCAGGCTTAAATCAGAGTATTAA 1662 0.4495 MDHEIKEPPPLSSTLCSQPSQFSQNTQETYPRYFQQDLNERKKKGTCFTCGQKDHWYRECPFKSSNNDSQNANSIWCRCGHGRCEKRTSKSEKNPGRMYYVCPIKRGEKCTNGFVKWCDDPDVESDWSQPPPFKYPECKCPAGVCKREKATHNGVVKYYFTCPVKEGHGNCGYKVWEDELLHKRTNDQDDHDFDEGVNLAVNHSKKMRIMDSSEEDPTPMAVSEAELSQSEDEALEKASQLSCLSESTPSRIGGDRQHVFPRHIFAGAGAGAGADPSFAPLGWLGRLLFSPPQSLKSPSSQTPQSIFCCVFPSFNPIDVPKQPSITNVPCAEHNQLDVIRLSQQSQLSSSERKLMSRAQRQRQLAFAAQKQLLNDLETSKPHEHESMKEAAQDTFAILNNLGANDTQFFEHVLDFIKLTSSVVQMTKSIECLEEDNKRLEDENAKLAHIRDLYAKTEDQFQASDQRRQLLSKEISDFEAMLVEKRNQLKSCELETSNMRIELGGLRRTMLEADTALKARMKQAEIAGKLRKEREAKQIAAKTALEKARLKSEY* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0905 553 Coils Coil 467 494 - -
Gso19g0905 553 SMART c2hcfinal6 46 62 IPR001878 GO:0003676|GO:0008270
Gso19g0905 553 Pfam GRF zinc finger 76 120 IPR010666 GO:0008270
Gso19g0905 553 Coils Coil 422 459 - -
Gso19g0905 553 MobiDBLite consensus disorder prediction 1 21 - -
Gso19g0905 553 SUPERFAMILY Retrovirus zinc finger-like domains 31 66 IPR036875 GO:0003676|GO:0008270
Gso19g0905 553 Gene3D - 23 74 - -
Gso19g0905 553 PANTHER OS07G0190500 PROTEIN 10 499 - -
Gso19g0905 553 ProSiteProfiles Zinc finger CCHC-type profile. 47 61 IPR001878 GO:0003676|GO:0008270
Gso19g0905 553 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 10 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0905 Gso-Chr19 35570753 35578127 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0905 - - gsj:114399244 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0905 19 35570753 35578127 Gso16g0387 16 4396334 4398036 GST