Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0387 ATGTCTCTATGGAATTCACCTTCTTCAACATCTCGAGTTCAGAGTCCTCAAAATACCCCTATAATTCCTGCTAGCTGCTCTCCAAAACTCGTGAAACGAATGCAACAAGAAACCTGTTACAAATGTGATCAACGAGGACATTGGTCTTATTACTGTCCTTACAAATCCCCCAAAACTAAACCCATCTCACCCTCACCCAAGCAAGATTCCACAGTTTCCTACAAAAGGGCTCATGGATCTTGTGGGTACGGTGTGACTGAGGATGAATTGCTCAATGGCAATAGCAACAGCATTGCTCGTTTAAAGCAAAGCAGGCAAAGAACTCTACATGATTTTTGGGAGGGATGCCAAAGCCAAAATGATGGTTCGCAAGAACAGATCAAAAGGATGAGAATCACAGACTGTTCTGAGAATCCAAACATTGAAGGTGCTAGTGCAACACAAAATGCTGCCAATGTGAAACGTGATGGTTTTTCAGAATTGGAGTCTGCTGCTGATGATATAGAATTCATGAACTCAGTCTCATGGGAAACTATTGAGGCAGAAGCAATTCTATCATTATCTCTTCGACAAATTATGTTTCAGAAGCGCATTTTCTCTGATGATTCATTTGAAATAGACAAGTCCAAGGAAAATTCCCTTACTATGGATGAGCAGAATAATCTCTTTGAGGAGAACAAAATGAGATTTGCTCAACTCCAAGACGAGTATGTCAAGACCGAAGCTTCACTTGAAGCATCAAACCAGCATAAGCAATTGCTTTGTGAACAGGTCTCTGATCTCAAGACCATGCTTGATGAAAAACAAAATCAATTAAAATGTTGTGAGTTGGAGACCTTGAAGATAGAGACTCGTCTTGGTGATCTGAAAAGAAGAATGTTGGAGACCCATTTTACATTGAAGGAAAGAGTTGAACAAACAGAAGAGGCAAGGAAACAAAGTGAAGAAAGACAAGCAAAGCTGCAGTGA 969 0.4035 MSLWNSPSSTSRVQSPQNTPIIPASCSPKLVKRMQQETCYKCDQRGHWSYYCPYKSPKTKPISPSPKQDSTVSYKRAHGSCGYGVTEDELLNGNSNSIARLKQSRQRTLHDFWEGCQSQNDGSQEQIKRMRITDCSENPNIEGASATQNAANVKRDGFSELESAADDIEFMNSVSWETIEAEAILSLSLRQIMFQKRIFSDDSFEIDKSKENSLTMDEQNNLFEENKMRFAQLQDEYVKTEASLEASNQHKQLLCEQVSDLKTMLDEKQNQLKCCELETLKIETRLGDLKRRMLETHFTLKERVEQTEEARKQSEERQAKLQ* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0387 322 MobiDBLite consensus disorder prediction 1 24 - -
Gso16g0387 322 Coils Coil 216 236 - -
Gso16g0387 322 ProSiteProfiles Zinc finger CCHC-type profile. 39 53 IPR001878 GO:0003676|GO:0008270
Gso16g0387 322 Coils Coil 251 278 - -
Gso16g0387 322 Coils Coil 297 322 - -
Gso16g0387 322 Gene3D - 2 71 - -
Gso16g0387 322 MobiDBLite consensus disorder prediction 303 322 - -
Gso16g0387 322 PANTHER OS07G0190500 PROTEIN 1 319 - -
Gso16g0387 322 SUPERFAMILY Retrovirus zinc finger-like domains 33 59 IPR036875 GO:0003676|GO:0008270
Gso16g0387 322 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0387 Gso-Chr16 4396334 4398036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0387 - - gmx:100804614 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0905 19 35570753 35578127 Gso16g0387 16 4396334 4398036 GST