Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0898 ATGGCACATTTGCATGAAGTGGATCGAAGCAAGAATGAAGTTATACGTTTAGAGCGGGAATCCGTGATTCCAATTCTGAAGCCTAAGCTCACAATGACACTGGCCAATCTTATTGAACATAGTTCTGACCGAGCTGAGTTCTTGAAGCTCTGCAAGAGAATAGAGTACACAATTCGAGCTTGGTACCTTCTACAGTTTGAGGACTTGATGCAACTATACTCCCTCTTTGACCCTGTACATGGGGCGCAAAAGTTGGAACAGCAGAAGTTATCTTCCGAAGAAATTGATGTGCTTGAACAGAATTTCTTGACATACCTATTTCAGGTCATGGAAAAGAGCAACTTCAAGATAGTGACTGATGATGAGATTGATGTTGCACATTCAGGCCAATATCTTCTAAATCTTCCCATTACTGTTGATGAATCTAAGCTTGACAAGACACTTCTGAAGAAATATTTTGAAGAGCATCATCATGATGACCTACCAGATTTTTCTGATAAGTATGTTATCTTTCGACGTGGCATTGGAATTGATCGAACAACTGACTACTTTGTGATGGAGAAAGTGGACATGCTTATTGGACGCTTTTGGGCATATCTATTGAGAGTAACTAGGTTGGAAAAGCTTCTATCCAGAAGGTCAAAAAGGCACAATAAGAAAGATCCAAAGAAGGACAATGAAATTAACTCTGGAGCAGATGGGCAGGACCTTTATGTTGAACGGATACGTCTTGAAAATATGCAACTAAGTTTCCATAATTTGCTGGGCAAGACCTTAATCCAAGAACCAACATTTGATAGGATAATTGTTGTCTACAGGAGAGCCAGAACCAAATCAAAAGAAGAACGAGGAATATATGTGAAGCATTTCAAAAACATTCCAATGGCTGATATGGAAATAGTTCTTCCAGAAAAGAAAAACCCTGGATTAACTCCAATGGATTGGGTCAAGTTTCTTGGATCAGCTATAGTTGGTTTGGTTGCTGTTGTTAGTTCACTTGAAATGCCTTCAGCTGATTGGTGGGTCATCATTGCTGTTCTCTCCACAGTAATTGGTTATATCGCTAAGACATACTTCACGTTCCAACAAAACATGGCTCAGTACCAAAATTTGATTACACAGTCAATGTATGACAAACAACTTGACAGTGGAAAGGGTACACTTCTTCATTTGTGTGATGATGTCATTCAACAGGAAGTCAAAGAGGTTATAGTTTCATTCTTTATTCTGATGGAACAGGGCAAAGCTACAAGACAGGATCTTGATCAATGGTGTGAGGAACTAATCAAAGAAGAGTTTGATGAGGAATGTAATTTTGATGTGGATGATGCTGTTGAGAAATTAGAGAAATTGGGAATTGTTACTCGAGATTCTGTTGGTCGATATCAATGTGTCGGGCTAAAACGGGCTAACGATATCATTGGCACCACCACTGAAGAGCTTGTCCTTAAGGCAAAACAGGGAAGCATGACTTCTTGA 1479 0.3942 MAHLHEVDRSKNEVIRLERESVIPILKPKLTMTLANLIEHSSDRAEFLKLCKRIEYTIRAWYLLQFEDLMQLYSLFDPVHGAQKLEQQKLSSEEIDVLEQNFLTYLFQVMEKSNFKIVTDDEIDVAHSGQYLLNLPITVDESKLDKTLLKKYFEEHHHDDLPDFSDKYVIFRRGIGIDRTTDYFVMEKVDMLIGRFWAYLLRVTRLEKLLSRRSKRHNKKDPKKDNEINSGADGQDLYVERIRLENMQLSFHNLLGKTLIQEPTFDRIIVVYRRARTKSKEERGIYVKHFKNIPMADMEIVLPEKKNPGLTPMDWVKFLGSAIVGLVAVVSSLEMPSADWWVIIAVLSTVIGYIAKTYFTFQQNMAQYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIVSFFILMEQGKATRQDLDQWCEELIKEEFDEECNFDVDDAVEKLEKLGIVTRDSVGRYQCVGLKRANDIIGTTTEELVLKAKQGSMTS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0898 492 PANTHER AMINOPEPTIDASE 6 491 - -
Gso19g0898 492 Pfam Protein of unknown function (DUF3754) 265 386 IPR022227 -
Gso19g0898 492 PANTHER AMINOPEPTIDASE (DUF3754) 6 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0898 Gso-Chr19 35354017 35374451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0898 - - gmx:100819645 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0898 19 35354017 35374451 Gso16g0392 16 4454093 4463400 GST
Gso16g1189 16 31122656 31130166 Gso19g0898 19 35354017 35374451 GST
Gso19g0898 19 35354017 35374451 Gso16g1189 16 31122656 31130166 PCT
Gso19g0898 19 35354017 35374451 Gso19g0898 19 35354017 35374451 PCT
Gso16g0392 16 4454093 4463400 Gso19g0898 19 35354017 35374451 PCT
Gso16g1189 16 31122656 31130166 Gso19g0898 19 35354017 35374451 PCT
Gso19g0898 19 35354017 35374451 Gso16g0392 16 4454093 4463400 PCT