Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1189 ATGTCCCATTCGGGTTTGGAAGAAATGGGCAACGAGAAGAAGAAGGAAGTGATTCGGATAGAGCGTGAATCGGTTATTCCAGTTTTGAAGCCTCAGCTCATCATGGCATTGGCCAACCTTATTAAACATAGTGCTGACCGAGTTGAATTTTTGAAGCTCTGCAAGAGAATAGAGTATACCATTCGAGCTTGGTACCTTCTACAGTTTGAGGACATGATGCAACTCTATTCTCTCTTTGATCCTGTGTCCGGGGCTCAGAAGTTGGAACAGCAGAAGTTACCTCGTGAAGAAATTGATGTTCTTGAGCAAAATTTCTTGACTTACCTATTTGAGGTCATGAAAAAAAGCAACTTCAAGATTGCAACTCAAGAAGAGATTGATATTGCACTTTCTGGACAGTATATTCTAAATCTTCCCATTACAGTAAATGAATCTAAGCTTGACAAGGTTCTTTTGAAAAACTATTTTGAAGCACATCCTCAAGATAACCTTCCAGATTCTTATGATAAGTATATTATTTTTCGGCGTGGCATTGGAATTGATCGAACAACTGATTACTTTGTCATGGAGAAAGTGGACATGCTCATAGCACGTTTTTGGTCATATATATTAAGAATAACCAGGTTGGAAAAGTTTTTATCCAGAAGGGCAAAAAGGCGTCGTAGGAAGGATCCCAAGAATGATGATGAAATTAACTTGGAGTTGGAAGATTTTCAGGATGATGTATATGAACGGATACGTCTTGAAAAAATGCCAATAAGTTTCGGTAGTTTGCTGAAAAAGACCACAATCCAAGAACCTACATTTGATAGGATTATTGTTGTGTACAGGCCAGCTAGCTCCAATTCAAAAAAAGAAAGAGGAATTTTTGTGAAGCATTTCAAGAACATTCCAATGGCTGATATGGAAATAGTTCTTCCAGAAAAGAAAAATCCTGGATTGACTCCAAAGGATTGGGTCAAGTTTCTTGCATCTGCAATGGTTGGGCTGGTTGCTGTAGCTAGTTCTCTTCATGTGGATTCAGCTGATTTGAGGGTCATTGGTGCCGTTCTCTCTACAGTACTTGGATATTTGGCCAAGACATACTTCACGTTCCAACAAAACTTGGTCCAATACCAAAATTTGATTACAAGGTCAATGTATGACAAACAACTGGACAGTGGAAAGGGTACACTTCTCCATTTATGTGATGATGTCATTCAACAGGAAGTTAAAGAGGTAATAATATCATTTTTCATTCTGATGGAGCAGGGAAAAGCTAATAGACAAGAACTCGATCAATGGTGCGAGGAGCTAATCAGAGAAGAGTTTGGAGAGAGCTGTAATTTTGACGTGGATGATGCAGTTAAGAAATTAGAGAAGTTCGGAATTGTCACCAAGGATATCATTGGCCGGTATCAATGCGTTGGGCTGAAAAGGGCTAACGAGATAATAGGCACCACCACTGAAGAACTTGTCCTTAAGGCAAGACAGGGGGGAAGCACCACTCCTTGA 1494 0.3963 MSHSGLEEMGNEKKKEVIRIERESVIPVLKPQLIMALANLIKHSADRVEFLKLCKRIEYTIRAWYLLQFEDMMQLYSLFDPVSGAQKLEQQKLPREEIDVLEQNFLTYLFEVMKKSNFKIATQEEIDIALSGQYILNLPITVNESKLDKVLLKNYFEAHPQDNLPDSYDKYIIFRRGIGIDRTTDYFVMEKVDMLIARFWSYILRITRLEKFLSRRAKRRRRKDPKNDDEINLELEDFQDDVYERIRLEKMPISFGSLLKKTTIQEPTFDRIIVVYRPASSNSKKERGIFVKHFKNIPMADMEIVLPEKKNPGLTPKDWVKFLASAMVGLVAVASSLHVDSADLRVIGAVLSTVLGYLAKTYFTFQQNLVQYQNLITRSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIISFFILMEQGKANRQELDQWCEELIREEFGESCNFDVDDAVKKLEKFGIVTKDIIGRYQCVGLKRANEIIGTTTEELVLKARQGGSTTP* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1189 497 PANTHER AMINOPEPTIDASE 1 496 - -
Gso16g1189 497 Pfam Protein of unknown function (DUF3754) 269 390 IPR022227 -
Gso16g1189 497 PANTHER AMINOPEPTIDASE (DUF3754) 1 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1189 Gso-Chr16 31122656 31130166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1189 - - gmx:100779123 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1189 16 31122656 31130166 Gso19g0898 19 35354017 35374451 GST
Gso19g0898 19 35354017 35374451 Gso16g1189 16 31122656 31130166 PCT
Gso16g0392 16 4454093 4463400 Gso16g1189 16 31122656 31130166 PCT
Gso16g1189 16 31122656 31130166 Gso19g0898 19 35354017 35374451 PCT
Gso16g1189 16 31122656 31130166 Gso16g0392 16 4454093 4463400 PCT