Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0892 ATGAGTGGCTATTATTTGGCTGCAAGACAACTAGAGTTTTTTAGGGGGAGAAGGAATTCAGGGCCAAATACAGACTCATTAGCTGATGCTTTAGCAATTGCGCAACACCATGATGCAGTCACTGGCACAGAAAAGCAGCATGTGGCTAATGATTATTCTAAACAATTGTCAATAGGCTACAAGGAGTGTCCACTTTTGAACATAAATTGCTGTCCTGCATCAGAAGTTGATCTGGTTCAAGGAAAGAATTTGTTTACAACTCTCTAG 267 0.4045 MSGYYLAARQLEFFRGRRNSGPNTDSLADALAIAQHHDAVTGTEKQHVANDYSKQLSIGYKECPLLNINCCPASEVDLVQGKNLFTTL* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0892 88 PANTHER ALPHA-MANNOSIDASE 1 85 - -
Gso19g0892 88 Pfam Alpha mannosidase middle domain 4 63 IPR015341 GO:0004559|GO:0006013
Gso19g0892 88 PANTHER ALPHA-MANNOSIDASE 1 85 - -
Gso19g0892 88 Gene3D Glycoside hydrolase family 38, central domain 22 71 IPR037094 GO:0004559|GO:0006013
Gso19g0892 88 SUPERFAMILY Families 57/38 glycoside transferase middle domain 3 65 IPR028995 -
Gso19g0892 88 SMART Alpha_mann_mid_2 2 56 IPR015341 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0892 Gso-Chr19 35141012 35144469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0892 1 86 Glycoside Hydrolase AT5G13980 58.559 5.22e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0892 K01191 - gmx:100795116 181.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0892 19 35141012 35144469 Gso16g0398 16 4518024 4534295 GST