LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso19g0877	ATGAGCAGTTGGAGAAGCCTTCTTCTACGAATCGGCGACAAGAGCCCTGAATATGGAGTCTCCTCCGACTACAAAGATCACATTGATACGTGCTTTGGCGCCCTTCGCCGCGAGCTCGACCTCTCTCAATCCGAGATTCTGGAGTTCCTTCTCATGTGTGCTGAGCAATTGCCTCACAAGATTCCTCTGTATGGTACCCTGATTGGCTTAATTAACTTGGAAAATGAGGACTTTGTGAAACAACTAGTGGTGAAAACTCAAAGTAAATTTCAGGATGCCTTAGATTCTGGAAACTGCAACGGGGTTCGTATTCTAATGCGGCTTTTGACTGTTATGATGAGCAGTAAGGTTCTTCAACCAAGCTCTTTGGTGGCTGTGTTTGAAACATTTTTATCATCAGCTGCCACAACAGTAGATGATGAGAAAGGGAATCCCTTATGGCAGTCATGTGCTGACTTTTACATAACTTGCATTTTATCATGCCTCCCATGGGGCGGAGCAGAACTTATTGAGCAAGTTCCTGAAGATATTGAGAGAGTGATGGTTGGTGTAGAAGCTTACTTGAGCATCAGAAAGCATACATTTGACATCGGATTATCCTTTTTCGAGAATGATGATGAAAACGGGAAAGGTCTTAGTGACAAGGATTTTTTGGAAGATTTATGGGATAGAATACAGGTTTTATCAAGCCACGGATGGAAGGTTGACAGTGTTCCAAGACCTCATCTTTCATTTGAAGCTCAGCTGGTTGCTGGGAAGTCTCATGAATTTGGGCCAATATGCTGCCCCCGCTTACCAAGCCCGCCTTCAGTCCCTTCTGGCGTGTCTATTGGTAAACAGAAGCATGAAGCAGAATTAAAATACCCTCAAAGGATACACCGGCTAAACATATTTCCTCCTGGTAAAATTGAGGATCTACAGCCTATAGACAGATTTGTTATGGAAGAGTATCTCCTAGATGTGCTTCTGTTCTTAAATGGCTGTCGAAAGGAATGCGCTTCTTTCATGGTTGGTCTGCCAGTTTCCTTCAGATATGAGTACCTCATGGCTGAAACAATATTCTCTCAGCTGCTGATGCTGCCACAACCACCTTTCAAACCAGTATATTACACACTGGTTATTATTGACCTTTGTAAGGCTCTTCCTGGAGCTTTTCCTGCAGTTGTAGCTGGAGCAGTTCGTACTCTCTTTGAGAGGATTGCTGATTTGGATATGGAGTGTCGGACACGTCTGATCCTTTGGTTCTCACACCATTTATCAAACTTCCAGTTCATCTGGCCTTGGGAAGAGTGGGCTTATGTCCTAGACCTCCCAAGGTGGGCCCCTCAACGCGTCTTTGTTCAGGAGGTTTTGGAGAGGGAAGTTCGCTTGTCATACTGGGACAAAGTTAAGCAGAGTATTGAAAATGCACCTGGTTTAGAAGAATTGCTTCCTCCAAAGGGTGGGCCGAACTTTAGTTTTGGTGCAGAAGATGGTAAAGAAAGCAATGAGCATGTACTGTCTGGACAGCTCAACAACATGGTTAAAGGAAAGGCACCTGTCCGTGAAATAATCTCATGGATTGATGAAAGTGTGTTTCCAAATAATGGTCTAGAAGTTACTCTTAGAGTGGTTGTACAAACTCTTCTCAATATTGGATCCAAGAGTTTCACTCATTTGATGACTGTCTTAGAGAGATATGGGCAAGTCTTTGCAAAAGTATGTCCCGACCAGGATAAGCAAGTCATGCTGATAGCTGAAGTGAGTGCTTTCTGGAAGAGTAACACCCAAATGACAGCAATAGCTATTGACAGGATGATGGGTTATCGACTTGTTTCAAATCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATACATCAGATCGTCCATGGGAGATTCTTAGAAATGCAGTAAGCAAGACACACAATCGTATTTCTGATCTAAGGAAAGAAATATTATCTCTTAAAAAGAATTTTTCATCTGCTGAAGAAACTGCAAAGGAGGCAAAAGCAGAGTTAGATGCTGCAGAGTCAAAACTTACACTAGTGGATGGCGAACCAGTTCTTGGTGACAATCCTACTAGATTGAATAGATTGAAATTACATGCTGAAAAGACAAAGAAGGAGGTGGTGTCTCTTCAAAAATCTTCAGAAGCCAAGGAAGCTCTTCTTGCCCAAGCAATGGAGGAAAATGAGGCATTGTTTCTCTTGTTGTACAAAAGCTTCTCAAACGTGTTCATAGAGCGCCTTCCTGAAGGAGCTAGAACACTGCATGAGTTGAAGTCTGCACAAGTTGATGTGGTGATGGCGGTGGACCCTGAAGAGCCATCATCAATGGAATTAGACAATGAGAGTCAGAGACCTCAAAACAGTCAGACAAATGGCGAGAAGAAAGGTGGTGCTTATAATGTAGGTGAAAAGGAGCAGTGGTGTATCATCACTTTGGGTTATGTGAAGGCCTTTTCTAGGCAGTATGCCGCTGAGATATGGCCCCATGTTGAAAAGTTGGATGCAGAGGTATTGACAGAAGATGCACCTCTTCTTTTTCGGTCATCTGTTTATTCTGGTCTTCGAAGACCAATTCATGACGCTTGA	2592	0.4309	MSSWRSLLLRIGDKSPEYGVSSDYKDHIDTCFGALRRELDLSQSEILEFLLMCAEQLPHKIPLYGTLIGLINLENEDFVKQLVVKTQSKFQDALDSGNCNGVRILMRLLTVMMSSKVLQPSSLVAVFETFLSSAATTVDDEKGNPLWQSCADFYITCILSCLPWGGAELIEQVPEDIERVMVGVEAYLSIRKHTFDIGLSFFENDDENGKGLSDKDFLEDLWDRIQVLSSHGWKVDSVPRPHLSFEAQLVAGKSHEFGPICCPRLPSPPSVPSGVSIGKQKHEAELKYPQRIHRLNIFPPGKIEDLQPIDRFVMEEYLLDVLLFLNGCRKECASFMVGLPVSFRYEYLMAETIFSQLLMLPQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRTLFERIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPRWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEELLPPKGGPNFSFGAEDGKESNEHVLSGQLNNMVKGKAPVREIISWIDESVFPNNGLEVTLRVVVQTLLNIGSKSFTHLMTVLERYGQVFAKVCPDQDKQVMLIAEVSAFWKSNTQMTAIAIDRMMGYRLVSNLAIVRWVFSAENIEQFHTSDRPWEILRNAVSKTHNRISDLRKEILSLKKNFSSAEETAKEAKAELDAAESKLTLVDGEPVLGDNPTRLNRLKLHAEKTKKEVVSLQKSSEAKEALLAQAMEENEALFLLLYKSFSNVFIERLPEGARTLHELKSAQVDVVMAVDPEEPSSMELDNESQRPQNSQTNGEKKGGAYNVGEKEQWCIITLGYVKAFSRQYAAEIWPHVEKLDAEVLTEDAPLLFRSSVYSGLRRPIHDA*	864

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso19g0877	863	SUPERFAMILY	ARM repeat	478	844	IPR016024	-
	Gso19g0877	863	SMART	if4_15	1	229	IPR003890	GO:0003723\|GO:0005515
	Gso19g0877	863	Gene3D	-	3	269	-	-
	Gso19g0877	863	Coils	Coil	637	685	-	-
	Gso19g0877	863	Pfam	MIF4G like	500	752	IPR015174	GO:0016070
	Gso19g0877	863	Pfam	MIF4G like	343	467	IPR015172	GO:0016070
	Gso19g0877	863	MobiDBLite	consensus disorder prediction	774	800	-	-
	Gso19g0877	863	Pfam	MIF4G domain	22	218	IPR003890	GO:0003723\|GO:0005515
	Gso19g0877	863	Coils	Coil	695	715	-	-
	Gso19g0877	863	Gene3D	-	490	848	-	-
	Gso19g0877	863	PANTHER	CAP BINDING PROTEIN	2	848	IPR027159	GO:0000339\|GO:0005846\|GO:0006406
	Gso19g0877	863	SUPERFAMILY	ARM repeat	2	296	IPR016024	-
	Gso19g0877	863	MobiDBLite	consensus disorder prediction	781	797	-	-
	Gso19g0877	863	Gene3D	-	299	481	-	-
	Gso19g0877	863	SUPERFAMILY	ARM repeat	295	478	IPR016024	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso19g0877	Gso-Chr19	34902260	34920529	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso19g0877	K12882		-	gmx:100791079	1676.76

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso19g0877	19	34902260	34920529	Gso16g0408	16	4696287	4713002	GST