Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0408 ATGAGCAGTTGGAGAAGCCTTCTTCTGCGAATCGGGGACAAGAGCCCCGAATATGGACCCTCCTCCGATTACAAAGATCACATTGATACGTGCTTTGGCGCCCTTCGCCGCGAGCTCGACCACTCCCAATCCGAGATTCTCGAGTTCCTTCTCATGTGTGCTGAGCAATTGCCTCACAAGATTCCTCTGTATGGTACCCTGATTGGCTTAATTAACTTGGAAAATGAAGACTTTGTGAAACAACTAGTGGAGAAAACTCAAAGTAAATTTCAGGATGCCTTAGATTCTGGAAACTGCAACGGGGTTCGTATTCTAATGCGGCTTTTGACTGTTATGATGAGCAGTAAGGTTCTTCAACCAAGCTCTTTGGTGGCTGTGTTCGAAACATTTTTATCATCAGCTGCCACAACAGTAGATGAGGAGAAAGGGAATCCCTTATGGCAGCCATGTGCTGACTTTTACATAACTTGCATTTTATCATGCCTCCCATGGGGTGGAGCAGAACTTACTGAGCAAGTTCCTGAAGATATCGAGAGAGTGATGGTTGGTGTAGAAGCTTACTTGAGCATCAGAAAGCATACATCAGATACTGGTTTATCCTTTTTTGAGAATGATGATGAAAATGGGGAAGGTCTTAGTGACAAGGACTTTTTGGAAGATTTATGGGATAGAATACAGGTTTTATCAAGCAATGGATGGAAGGTTGACAGCGTTCCAAGACCTCATCTTTCATTTGAAGCCCAGCTGGTTGCTGGGAAGTCTCATGAATTTGGGCCAATATGCTGCCCCAGCTTACCAAGCCTGCCTTCAGTCCCTTCTGGCGTGTCTATTGGTAAACAGAAGCATGAAGCAGAATTAAAATATCCTCAAAGTATACACCGGCTTAACATATTTCCTCCTAGTAAAATTGAGGATCTACAGCCTATAGACAGATTTGTTATGGAAGAGTATCTCCTAGATGTGCTTCTGTTCTTAAATGGCTGTCGAAAGGAATGTGCTTCTTTCATGGTTGGCCTGCCAGTTTCCTTCAGATACGAGTACCTCATGGCGGAAACAATATTCTCTCAGCTGCTGATGCTACCACAACCACCTTTCAAACCAGTATATTACACATTGGTTATTATTGACCTTTGTAAGGCTCTTCCTGGAGCCTTTCCTGCAGTTGTAGCTGGAGCAGTTCGTACTCTCTTTGAGAGGATTGCTGATTTGGATATGGAGTGTCGGACGCGTCTGATCCTTTGGTTCTCACACCATTTATCAAACTTCCAGTTCATCTGGCCATGGGAAGAGTGGGCTTATGTCCTAGACCTCCCAAGGTGGGCCCCTCAACGTGTCTTTGTTCAAGAGGTTTTGGAGAGGGAAGTTCGCTTGTCATACTGGGACAAAGTTAAGCAGAGTATTGAAAATGCACCTGGTTTAGAAGAATTGCTTCCTCCAAAGGGTGGGCCGAACTTTAGTTTTGGTGCAGAAGATGATAAAGAAAGCAATGAACATGTACTGTCTGGACAGCTCAACAACATGGTTAAAGGAAAGGCACCTGTCCGTGAAATAATCTCATGGATTGATGAAAGTGTGCTTCCAAATAATGGTCTAGAAGTTACCCTCAGAGTGGTTGTACAAACTCTTCTCAATATTGGATCCAAGAGTTTCACTCATTTGATGACTGTCTTAGAGAGATATGGGCAAGTCTTTGCAAAATTATGTCCTGACCAGGATAAGCAAGTCATGCTGATAGCTGAAGTGAGTTCTTTCTGGAAGAGTAATACCCAAATGACAGCAATAGCTATTGACAGGATGATGGGTTATCGGCTTGTTTCAAATCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAGAATATTGAGCAATTTCATATGTCAGATCGTCCTTGGGAGATTCTTAGAAATGCAGTAAGCAAGACACACAATCGTATTTCTGATCTAAGGAAAGAAATATTATCTCTTAAAAAGAATATTTCATCATCTGAAGAAGCTGCCAAGGAAGCAAAAGCAGAGTTAGATGCTGCAGAGTCAAAACTTACACTAGTGGATGGTGAACCAGTTATTGGCGACAATCCTGCTAGGTTGAATAGATTGAAATCACATGCTGAAAAGACAAAGGAGGAGGTGGTGTCTCTTCAAGAATCTTTAGAAGCCAAGGAAGCTCTTCTTTCCCGAGCAATTGAGGAAAATGAGGCATTGTTTCTCTTGTTGTACAAAAGCTTCTCAAACGTGTTGACAGAGCGCCTTCCTGAAGGATCTAGAACACTGCATGAGTTGAAGTCTGCACAAGTTGATGTGGTGATGGCAGTGGACCCTGAAGAGCCATCGTCAATGGAATTAGACAACCAGAATCAGAGACCTCAAAACAGTCATACAAATGGCGAGAAGAAAGGTGGTGCTTATAATGTAGGTGAAAAGGAGCAGTGGTGTATCACCACTTTGGGCTATGTGAAGGCCTTCTCTAGGCAGTATGCTGCTGAGATATGGCCCCATGTTGAGAAGTTGGATGCAGAGGTATTGACAGAAGATGCACCTCTTCTTTTTCGGTCAGCTGTTTATTCTGGTCTTCGAAGACCAATTCACGAGGCTTGA 2592 0.4333 MSSWRSLLLRIGDKSPEYGPSSDYKDHIDTCFGALRRELDHSQSEILEFLLMCAEQLPHKIPLYGTLIGLINLENEDFVKQLVEKTQSKFQDALDSGNCNGVRILMRLLTVMMSSKVLQPSSLVAVFETFLSSAATTVDEEKGNPLWQPCADFYITCILSCLPWGGAELTEQVPEDIERVMVGVEAYLSIRKHTSDTGLSFFENDDENGEGLSDKDFLEDLWDRIQVLSSNGWKVDSVPRPHLSFEAQLVAGKSHEFGPICCPSLPSLPSVPSGVSIGKQKHEAELKYPQSIHRLNIFPPSKIEDLQPIDRFVMEEYLLDVLLFLNGCRKECASFMVGLPVSFRYEYLMAETIFSQLLMLPQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRTLFERIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPRWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEELLPPKGGPNFSFGAEDDKESNEHVLSGQLNNMVKGKAPVREIISWIDESVLPNNGLEVTLRVVVQTLLNIGSKSFTHLMTVLERYGQVFAKLCPDQDKQVMLIAEVSSFWKSNTQMTAIAIDRMMGYRLVSNLAIVRWVFSAENIEQFHMSDRPWEILRNAVSKTHNRISDLRKEILSLKKNISSSEEAAKEAKAELDAAESKLTLVDGEPVIGDNPARLNRLKSHAEKTKEEVVSLQESLEAKEALLSRAIEENEALFLLLYKSFSNVLTERLPEGSRTLHELKSAQVDVVMAVDPEEPSSMELDNQNQRPQNSHTNGEKKGGAYNVGEKEQWCITTLGYVKAFSRQYAAEIWPHVEKLDAEVLTEDAPLLFRSAVYSGLRRPIHEA* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0408 863 Pfam MIF4G like 497 826 IPR015174 GO:0016070
Gso16g0408 863 Coils Coil 695 729 - -
Gso16g0408 863 Gene3D - 298 481 - -
Gso16g0408 863 Pfam MIF4G domain 21 208 IPR003890 GO:0003723|GO:0005515
Gso16g0408 863 Coils Coil 637 685 - -
Gso16g0408 863 MobiDBLite consensus disorder prediction 777 796 - -
Gso16g0408 863 SUPERFAMILY ARM repeat 294 478 IPR016024 -
Gso16g0408 863 Gene3D - 3 270 - -
Gso16g0408 863 Gene3D - 489 849 - -
Gso16g0408 863 SUPERFAMILY ARM repeat 478 845 IPR016024 -
Gso16g0408 863 MobiDBLite consensus disorder prediction 774 800 - -
Gso16g0408 863 SUPERFAMILY ARM repeat 2 295 IPR016024 -
Gso16g0408 863 SMART if4_15 1 229 IPR003890 GO:0003723|GO:0005515
Gso16g0408 863 Pfam MIF4G like 343 467 IPR015172 GO:0016070
Gso16g0408 863 PANTHER CAP BINDING PROTEIN 2 858 IPR027159 GO:0000339|GO:0005846|GO:0006406
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0408 Gso-Chr16 4696287 4713002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0408 K12882 - gmx:100811738 1671.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0877 19 34902260 34920529 Gso16g0408 16 4696287 4713002 GST