LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso19g0859	ATGCTAGATGCTTTGCTTGAAAGGATGGGGTGCACTTACTCTGTGTATAGGAAGAAAAAATCAAGCTTCCCTGAAGTGGTGGTCTTTGTTCCATCAACAAGAATTCCGGTTCAATCTGATCTCCAAAGGATGGTCAAGGGTGTAATTCCAAGGGATCTTGCTGATAAATTAACTTCACTAAGGAATCAGATAGTGTTGATTGCAGAGGATACTGGTGGGTCAGCTATAGCTGAATTGCGGCGAGCTTTGAAAGAATATTTGTCTGTTCTGATTGGACTTACAAAGAAAGAGTATGGTCCTGAAGGACTAATAGATTTCAAGTGGAAAAATTTAGAAGATGGGAGACAAGATAGCAGTATATCAAATACCTGGTTTGAGGTGCTATCTTCAGTTCACCTTATGGCTATGCTGACACTCTCTGACGCTGACTCACTGATGATTCCAAAGGATCCCTCAGGGTCTGGATTCAGGGTTGTATCTTCAGATAGCAAGAGGGAAGCAATTGATTTGTTACTCAAGGCATCAGGATACCTGGAGTTCTGTGTAAGGGATGTTCTTACTCGGATACCTGCTGAAACAAAGAAAACTTTTCCCCACGACTTACAGGAAGGTGTATTGGAGGCTATTGCTATTCAAACACTAGGCCAGGGAACTGAGATTCAACTTGGTCTTGCGGTGGAAAGTCAGAAGGCAACTTTGTCTGTGAAGAGGAGGTTGGCATGTGAACAGCTGATTTACTTTACTCAGGCTTATCACTGCTTGTCAGGATGCGACATCAACCAAGGGCATGGAAGGAAGCAAATTCGATTTATCAAATGGAAGTTCCTTGAAGCCAAGGCTGCAGCCTACTACTACCATGGTCTGATCCTTGACAAGGGTAGTGAACCAAGCATCCACATTGGTTCTGTGTCTTGTTTTCTTGCTGCAGAAGAGCTTCTGGCTGAAAGCAAGAAGGCCTGCTTAAGCTTTTGTCTTGCACCTCCAGTGACAAGGGGTCTTCAATCATTGCCAGACCTTCCTGAGTTCCAATTATCATTACGTCCAGATGACTATGAATTGCCTGAAATTGATCCGGCATGGGATAGTGAAAACTGGGAATCTCTTGGGCAGCCATTGAAGGAGCACCTTAGAGATAGTGATGAGCATGATGAGAATCCAACTGATTGA	1167	0.437	MLDALLERMGCTYSVYRKKKSSFPEVVVFVPSTRIPVQSDLQRMVKGVIPRDLADKLTSLRNQIVLIAEDTGGSAIAELRRALKEYLSVLIGLTKKEYGPEGLIDFKWKNLEDGRQDSSISNTWFEVLSSVHLMAMLTLSDADSLMIPKDPSGSGFRVVSSDSKREAIDLLLKASGYLEFCVRDVLTRIPAETKKTFPHDLQEGVLEAIAIQTLGQGTEIQLGLAVESQKATLSVKRRLACEQLIYFTQAYHCLSGCDINQGHGRKQIRFIKWKFLEAKAAAYYYHGLILDKGSEPSIHIGSVSCFLAAEELLAESKKACLSFCLAPPVTRGLQSLPDLPEFQLSLRPDDYELPEIDPAWDSENWESLGQPLKEHLRDSDEHDENPTD*	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso19g0859	388	Gene3D	alix/aip1 like domains	42	369	IPR038499	-
	Gso19g0859	388	ProSiteProfiles	BRO1 domain profile.	1	388	IPR004328	-
	Gso19g0859	388	PANTHER	ENDOSOMAL TARGETING BRO1-LIKE DOMAIN-CONTAINING PROTEIN	332	384	-	-
	Gso19g0859	388	PANTHER	ENDOSOMAL TARGETING BRO1-LIKE DOMAIN-CONTAINING PROTEIN	9	331	-	-
	Gso19g0859	388	PANTHER	UNCHARACTERIZED	332	384	IPR038898	-
	Gso19g0859	388	PANTHER	UNCHARACTERIZED	9	331	IPR038898	-
	Gso19g0859	388	SMART	BRO1_2	27	380	IPR004328	-
	Gso19g0859	388	CDD	BRO1_Alix_like	19	325	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso19g0859	Gso-Chr19	34678104	34685649	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso19g0859	-		-	gsj:114399503	743.806

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso19g0859	19	34678104	34685649	Gso16g0419	16	4830049	4835302	GST