Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0419 ATGGGGTGCACTTACTCTGTGTATAGGAAGAAAAAATCAAGCTTTCCTGAAGTGGTGGTCTTTGTTCCATCAACAAGAATTCCGGTTCAATCTGATCTCCAAAGGGTGCTTAAGGGAGTAATTCCAAGGGATCTTGCTGATAAATTGGCTGCACTAAGGAATCAGATAGTGTTGATTGCAGAGGATACTGGTGGGTCAGCTGTAACTGAATTGCAGCGAGCTTTGAATGAATATTTGTCCGTTCTGATTGGACTTACTAAGAAAGAGTATGGTCTAGAAGGAGTAATAGATTTCAAGTGGAAAAATATAGAAGATGGGAGACAATCCAATTGGCAGGATAGCAGTATATCAAATACCTGGTTTGAGGTGCTATCTTCAGTTCACCTTATGTCTATGCTGACACTCTCAGAGGCTGACTCACTGATGATTCCAAAGGACCCCTCAGGCTCTGGATTCAGGGTTGTATCTTCAGATAGCAAGAGGGAAGCAATTGATTTGTTACTCAAGGCATCAGGATACCTGGAGTTCTGTGTAAGGGATGTTCTTACTCGGATACCTGCTGAAACCAAGAAAACTTTCCCCCACGACTTGCAGGAGGGTGTATTGGAGGCTATTGCTATTCAAACACTAGGCCAGGGAACTGAGATTCAACTTGGTCTTGCGGTGGAAAGTCAGAAGGCAACTTTGTCTGTGAAGAGGAGGTTGGCATGTGAGCAGCTGATTTACTTTAGTCAGGCGTATCACTGCTTGTCAGGATGCGACATCAACCAAGGGCTTGGAAGGAAGCATATTCGATTTATCAAATGGAAGTTCCTTGAATCCAAGGCTGCAGCCTACTACTACCATGGACTGATCCTTGACAAGGGTAGTGAACCAAGCAGCCACATTGGTGCTGTGTCTTGTTTTCTTGCCGCAGAAGAACTTCTGGCTGAAAGCAAGAAGGCATGCTTAAGCTTTTGTCTTGCACCTCCAGTGACAAGGGCTCCTCCAGTCTGGGGTGCTATGAAATTCTTACACCAGAAAATTCCTGAAGTTGCATCAAGGAAGTCCCAGATGTATGGCTACCTCTGGGAGAGAGAGAAAGGACTTCAATCATTGCCAGATCTTCCTGAGTTCCAATTATCATTACGTCCAGATGACTATGAACTGCCTGAAATTGATCCTGCATGGGATAGTAAAAACTGGAAATCTCTAGGGCAGCCATTGAAGGAGCACCTTAGAGATAGTGATGAGACTGAAGAGAATCCAACTGATTGA 1257 0.4439 MGCTYSVYRKKKSSFPEVVVFVPSTRIPVQSDLQRVLKGVIPRDLADKLAALRNQIVLIAEDTGGSAVTELQRALNEYLSVLIGLTKKEYGLEGVIDFKWKNIEDGRQSNWQDSSISNTWFEVLSSVHLMSMLTLSEADSLMIPKDPSGSGFRVVSSDSKREAIDLLLKASGYLEFCVRDVLTRIPAETKKTFPHDLQEGVLEAIAIQTLGQGTEIQLGLAVESQKATLSVKRRLACEQLIYFSQAYHCLSGCDINQGLGRKHIRFIKWKFLESKAAAYYYHGLILDKGSEPSSHIGAVSCFLAAEELLAESKKACLSFCLAPPVTRAPPVWGAMKFLHQKIPEVASRKSQMYGYLWEREKGLQSLPDLPEFQLSLRPDDYELPEIDPAWDSKNWKSLGQPLKEHLRDSDETEENPTD* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0419 418 Gene3D alix/aip1 like domains 32 399 IPR038499 -
Gso16g0419 418 ProSiteProfiles BRO1 domain profile. 1 418 IPR004328 -
Gso16g0419 418 PANTHER UNCHARACTERIZED 1 414 IPR038898 -
Gso16g0419 418 CDD BRO1_Alix_like 11 379 - -
Gso16g0419 418 SMART BRO1_2 19 386 IPR004328 -
Gso16g0419 418 PANTHER ENDOSOMAL TARGETING BRO1-LIKE DOMAIN-CONTAINING PROTEIN 1 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0419 Gso-Chr16 4830049 4835302 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0419 - - gmx:100803541 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0859 19 34678104 34685649 Gso16g0419 16 4830049 4835302 GST