Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0839 ATGCCGGAAGAAGAAGTGCTGGAGCTCAAGTTCCGTCTCTACGATGGATCCGACATCGGACCCTTCCGTTACTCCCCTGCCTCCACCATCGCCATGCTCAAGGACCGCATTTTTGCAGACTGGCCCAGAGACAAGAAAATTATACCAAAGGCAGCAAATGATATAAAGCTGATAAGTGCTGGCAAAATTTTGGAAAACAACAAGACAGTTGGCCAGTGTAGAGTACCTTTTGGCGAGCTTCCCAAAGGGGGGGTTATAACCATGCATGTTGTGGTGCAGCCATCTTTGCTCAAAACAAAAACAGAGAAAAAAGTTGATGAGGTGCCCAGAAAACATAAATGTGCATGTTCGATATTGTGA 360 0.4611 MPEEEVLELKFRLYDGSDIGPFRYSPASTIAMLKDRIFADWPRDKKIIPKAANDIKLISAGKILENNKTVGQCRVPFGELPKGGVITMHVVVQPSLLKTKTEKKVDEVPRKHKCACSIL* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0839 119 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 117 IPR039540 -
Gso19g0839 119 PIRSF MUB 1 119 IPR017000 -
Gso19g0839 119 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 119 IPR040015 -
Gso19g0839 119 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 1 119 - -
Gso19g0839 119 SUPERFAMILY Ubiquitin-like 2 97 IPR029071 -
Gso19g0839 119 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Gso19g0839 119 CDD Ubl_MUBs_plant 7 94 - -
Gso19g0839 119 Gene3D - 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0839 Gso-Chr19 34032096 34036909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0839 - - gmx:100306698 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0839 19 34032096 34036909 Gso16g0434 16 5060242 5064606 GST