Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0434 ATGCCGGAGGAAGAAGTAGTGGAGCTCAAGTTCCGTCTCTACGATGGATCCGACATCGGTCCCTTCCGTTACTCCCCTGCCTCCACCATCGCCATGCTCAAGGACCGCATTTTTGCAGACTGGCCCAAAGACAAGAAGATTATACCAAAAGCAGCAAATGATATAAAACTGATAAGTGCTGGCAAAATTTTGGAGAACCACAAGACAGTTGGCCAGTGTAGAGTACCTTTTGGCGAGCTTCCCAAAGGGGTTATAACCATGCATGTTGTGGTCCAGCCATCTTTGCTCAAAGCAAAAACAGAGAAAAAAGTTGATGAGGTGCCCAGAAAACATATATGTGCATGTTCGATATTGTGA 357 0.4594 MPEEEVVELKFRLYDGSDIGPFRYSPASTIAMLKDRIFADWPKDKKIIPKAANDIKLISAGKILENHKTVGQCRVPFGELPKGVITMHVVVQPSLLKAKTEKKVDEVPRKHICACSIL* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0434 118 Gene3D - 1 100 - -
Gso16g0434 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 116 IPR039540 -
Gso16g0434 118 CDD Ubl_MUBs_plant 7 93 - -
Gso16g0434 118 SUPERFAMILY Ubiquitin-like 2 95 IPR029071 -
Gso16g0434 118 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Gso16g0434 118 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 1 118 - -
Gso16g0434 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 118 IPR040015 -
Gso16g0434 118 PIRSF MUB 1 118 IPR017000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0434 Gso-Chr16 5060242 5064606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0434 - - gmx:100500075 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0839 19 34032096 34036909 Gso16g0434 16 5060242 5064606 GST