Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0785 ATGACTAATAGAAAAGCATTACCTGTTCCAACCTTTGTTAGTGGCTTTTGTTTTAGTTACCATAGTTCGCAAAAGAAGATGAGAGTTAGGGAGTTATCACCCTCTGATGGCAATGGTTCCTCTACTAATGAAGATGAACCTTTACCTCAGGATGCAGATTATATTAATGTTCTGAGTCTTAGTGATGAGCTAGAGACTTCAATCTTGGCAAGATTTCCAAGATCACAGCACTGGAAGTTGTGCTTTCTCAACAAGCGGTTCTTGGCTCTCTCAAGGAGTGGCGAGATCTACAAAATAAGGAGAGAGTTAGGATTCAAAGAACCTTCAGTGTTCATGCTGGTAAGTGGGGAGAGCAATTGGTGGGGAATGGAGTGGCCTTTCATGTCAAGCAAGAAGCTCCCTCCTATCCAATCAGATTATAATTTTGAGTTTGGAGATAAGGAGTCATTTTGTGCAGGCTCTCACCTATTAGTCTCAGGCAAGGAGATTGATGGGGCTGTTATTTGGAGGTTCAATTCGATAAAAAATGAATGGCGCAAAGGGCCATCTATGATCAATCCAAGGTGTCTTTTTGCATCAGCCACTTGCAGTGCTATTGCTTTTGTTGCTGGGGGGCTTGATGCAGGAACTTACACCCAAGTCTTGGATTCTGCTGAGAAGTACAACTCTGAAAGCCGGTGTTGGGAGCCCCTCCCAAGAATGAACAAGAAGAGAAAGTTTTGCTCAGGTTGTTTCATGGACAACAAATTCTATGTCCTTGGAGGGCAAGATGAGCATGGAAAGGACCTCACTTGTGGGGAATTCTTTGATGGAAAGGCAAATAGTTGGAACTTGATTCCTGACATGTGGAAGGATATTGTTTCACAGTCTCCACCTCTTCTTGCTGTTGTGAACAATGAGTTGTACACACTGGATGCTTCTTCCAATGAGCTGAAAGTGTATGTGAAAGGAACCAACACATGGAAGACTTTGGGAGTGGTTCCTGTGAGAGCTGATGCACAAGGAGGTTGGGGTGTGGCTTTTAAGTCTCTTGGTGATGAGTTGCTTGTTATTGGTGCACCTTCTATGCCACACATAGTGCATGCCTTGTCTATGTACACTTGCTGCCCTGATCCTGATGATGAGAAATTGAGGTGGAGGCAAATTGGATGTGGCAGCATTCAGCTTAATCACTTTATCCGCAATTGTGCGGTGATGGGGACCTGA 1206 0.4403 MTNRKALPVPTFVSGFCFSYHSSQKKMRVRELSPSDGNGSSTNEDEPLPQDADYINVLSLSDELETSILARFPRSQHWKLCFLNKRFLALSRSGEIYKIRRELGFKEPSVFMLVSGESNWWGMEWPFMSSKKLPPIQSDYNFEFGDKESFCAGSHLLVSGKEIDGAVIWRFNSIKNEWRKGPSMINPRCLFASATCSAIAFVAGGLDAGTYTQVLDSAEKYNSESRCWEPLPRMNKKRKFCSGCFMDNKFYVLGGQDEHGKDLTCGEFFDGKANSWNLIPDMWKDIVSQSPPLLAVVNNELYTLDASSNELKVYVKGTNTWKTLGVVPVRADAQGGWGVAFKSLGDELLVIGAPSMPHIVHALSMYTCCPDPDDEKLRWRQIGCGSIQLNHFIRNCAVMGT* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0785 401 MobiDBLite consensus disorder prediction 28 49 - -
Gso19g0785 401 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 400 - -
Gso19g0785 401 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 400 - -
Gso19g0785 401 Gene3D - 105 382 IPR015915 GO:0005515
Gso19g0785 401 SUPERFAMILY Kelch motif 150 356 IPR015915 GO:0005515
Gso19g0785 401 SMART kelc_smart 155 198 IPR006652 GO:0005515
Gso19g0785 401 SMART kelc_smart 199 248 IPR006652 GO:0005515
Gso19g0785 401 SMART kelc_smart 249 299 IPR006652 GO:0005515
Gso19g0785 401 Pfam Kelch motif 187 235 IPR006652 GO:0005515
Gso19g0785 401 Pfam Kelch motif 238 282 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0785 Gso-Chr19 32168036 32170780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0785 58 231 Miscellaneous Gene Families AT4G33900 25.888 9.88e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0785 - - gmx:100783477 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0785 19 32168036 32170780 Gso16g0472 16 5560945 5563824 GST