Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0472 ATGACTAATAGAAAAGCATTACCTGTTCCATCCTTTGTTAGTGGTATTTGTTTCAGTTACCATAGTTCCCAAAAGAAGATGAGAGTTAGGGAGTTATCACCCTCTGATGGCAATGGTTCCTCTACTAATGGAGATGAACCTTTACCTCAGGATGCAGATTATAGTAATGTTCTAAGTCTTAGTGATGAGCTAGAGACTTCAATCTTGGCAAGGTTTCCAAGATCACAGCACTGGAAACTGTGCTTTCTCAACAAGCGGTTCTTGGCCCTTGCGAGGAGTGGCGAGATCTACAAAATAAGGAGAGAGTTAAGATTCAAAGAACCTTCAGTGTTCATGCTGGCAAGTGGAGAGAGCAATTGGTGGGGAATGGAGTGGCCTTTCAACTCAAGCAAGAAGCTCCCTCCTATTCAATCAGATTACAATTTTGAGTATGGAGATAAGGAGTCATTTTGTGCAGGTTCCCACCTATTAGTCTCTGGCAAGGAGATTGATGGGGCTGTTATTTGGAGGTTCGATTCAATTAAAAATGAATGGCTCAAAGGGCCATCTATGATCAATCCAAGGTGTCTTTTTGCATCAGCCACATGTGGTGCTATTGCTTTCGTTGCTGGGGGGTTTGATGCAATAACTTACACACAAGTCTTGGATTCTGCTGAGAAGTACAATTCCGAAAGCCAGTGTTGGGAGCCCCTTCCAAGGATGAACAAGAAGAGGAAGTTTTGCTCAGGTTGTTTCATGGACAACAAGTTCTATGTCCTTGGAGGGCAAGATGAGCATGGGAAAGACCTCACTTGTGGGGAATTCTTTGATGGCAAGACAAATAGTTGGAACTTGATTCCTGACATATGGAAGGATATTCCTCTATTTGATTCACAGTCTCCACCTCTTCTTGCTGTTGTGAATAATGAGTTGTACTCACTTGATGCTTCTTCAAATGAGTTGAAAGTGTATGTGAAAGGAACCAACTCATGGAAGACTTTGGGAGTGGTTCCTGTGAGAGCTGATGCACAAAGAGGTTGGGGTGTGGCTTTTAAGTCTCTTGGTGATGAGTTACTTGTTATTGGTGCACCTTCTGTGTCACACACAGTGCATGCCTTGTCTATGTACACTTGCTGCCCTGATCCTGATGATGAGAAATTGAGGTGGAGGCAAATTGGATGTGGCAGCATTCAGCTCAATCACTTTATCCGCAATTGTGCTGTGATGGGGACCTGA 1215 0.4346 MTNRKALPVPSFVSGICFSYHSSQKKMRVRELSPSDGNGSSTNGDEPLPQDADYSNVLSLSDELETSILARFPRSQHWKLCFLNKRFLALARSGEIYKIRRELRFKEPSVFMLASGESNWWGMEWPFNSSKKLPPIQSDYNFEYGDKESFCAGSHLLVSGKEIDGAVIWRFDSIKNEWLKGPSMINPRCLFASATCGAIAFVAGGFDAITYTQVLDSAEKYNSESQCWEPLPRMNKKRKFCSGCFMDNKFYVLGGQDEHGKDLTCGEFFDGKTNSWNLIPDIWKDIPLFDSQSPPLLAVVNNELYSLDASSNELKVYVKGTNSWKTLGVVPVRADAQRGWGVAFKSLGDELLVIGAPSVSHTVHALSMYTCCPDPDDEKLRWRQIGCGSIQLNHFIRNCAVMGT* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0472 404 MobiDBLite consensus disorder prediction 29 52 - -
Gso16g0472 404 Gene3D - 98 386 IPR015915 GO:0005515
Gso16g0472 404 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 403 - -
Gso16g0472 404 SUPERFAMILY Kelch motif 149 365 IPR015915 GO:0005515
Gso16g0472 404 SMART kelc_smart 199 248 IPR006652 GO:0005515
Gso16g0472 404 SMART kelc_smart 155 198 IPR006652 GO:0005515
Gso16g0472 404 MobiDBLite consensus disorder prediction 34 52 - -
Gso16g0472 404 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 403 - -
Gso16g0472 404 Pfam Kelch motif 187 235 IPR006652 GO:0005515
Gso16g0472 404 Pfam Kelch motif 238 281 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0472 Gso-Chr16 5560945 5563824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0472 44 279 Miscellaneous Gene Families AT4G33900 26.033 3.43e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0472 - - gmx:100777338 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0785 19 32168036 32170780 Gso16g0472 16 5560945 5563824 GST