Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0758 ATGTCTAAGGCCAATCTCTCTCGGTTGAGAAGTGACCCTGTAAGGATTGCTGCTTTCTGCTTCAAGAACCTGAAGAGAACTGAGGTCCTTGATACTGACATTTCTTCAGCTGTTGACAAGATTTTGCAAGAAATGGATGTTGTATCCTATAGAGTGCTTGGCTATCTTCTTGTTGGCATTATAAGAATATTCTCTAAAAAGGTTGAATATGTGCTTGAGGATTGCAATGAGGTTCTCATTAAAATCAATAAATTTGTGGTCAACAAAGAAGGCATTGTCCGTGTGGAAACCTTGCGCATGCCTGTTACTATACCAGACAGATTAGAGTTGGATGTTTTTGAGTTAGATGAACTTGAAAATGTTGACAGAGGCCACACTGCTCCTCCGGAGGAAATTACGCTTAGAGACAAAGAAAATGTGTGTAAAACAGAGGGATTTGGGCTGTTTTCTCACGAGAAGTTTGAGGAGTTTGATGTTGCTGAAAATACCAGCTCTTTTGATCAAGATATAGTGGGAAATGCTTTTCTATCTAAACTGTTGAATATGATGGACATCGAAGTTTCTCCACAAAATAGTCCAACTGATTTACTCCTGGAAAGCTGGGATAAATTTCAAAGCAGCATATCTGCCTTTCAAGAAAAGGTTCCGATTGAAGATGAAAGGCTTAGTGTTATTCCACCAAAGTCAAAAAATCTTGATGCAACTCCTCAGTCTAAGTTTCAAGGCGTTGGAAGACCAAAACAAGATTCTGCTACACCAGAGTCAATGCATGTTTCTACACCAGCTGTGAGGGAACAGCCTCCCTTTTCAAGGAAAAGAAGAGTTGGCCTTGATAGAATGATTGTCCTGTCTAACAAGGCAGTTATAAAGAACATAAAGAGTGCAAAAGACTTAGTACGTTTCCCTTTCCCAAGAGAATCCCGCCGTACTTTACTTAATGCACACTGTGTGCAGAGACAGAGAGAATCTCCAATTTCCAGTCTTCCTAATAGATTCTACGAGCCTTTGCTTCCTTGTTCTTCCTCTGAGCTTCAACTCCTATTCTCTAAAAAGAAAATGAAATTACCTAATTCCCTTAAGATTGTGGAAACTCCAGGGAATTTAGATGTGCCAGAATCTCCAATTGCTGGCACTCCACTAAGCCCTTCTCAATCCTCAGATTCCCTTGAAATTGAGGAAACTCGAAGGGTGTTAGATGTACCTGAGTCTCAGGCTTCTGGCTTTCCAAAGCATAAAGCAACTGATTCACAGACTCCTCCTTTGAGTCAACATGAAAACATAGAGATAGAATCTCTAGAAACGAATGAAGTGCCTAATTTGATGGATGAGGAAACAAATTCACGTGGAACAAATGAATCAGAATTATTAGCTGGGTGGTCTGGTCGAACCAGGGAAGTTGCAAGTTGTTTGCATCAGAGTTTTCTACATGCAAGAAAACAAAGAGAGGACACCGTAAACTTTTCACAAGTTTTTGGAGGCCGAGCACGGAAAGAATCTGCACTGCTGTTTTATGAAGTACTGGTTTTGAAAACTACAGGCTATGTAGATGTGGAGCAAAACAAAGCTTATGGTGATATTGCAATATCTAGACTCCCTAAATTAGATCAAACTTTTTTATTTGATGGTCTATTAGAATGA 1638 0.398 MSKANLSRLRSDPVRIAAFCFKNLKRTEVLDTDISSAVDKILQEMDVVSYRVLGYLLVGIIRIFSKKVEYVLEDCNEVLIKINKFVVNKEGIVRVETLRMPVTIPDRLELDVFELDELENVDRGHTAPPEEITLRDKENVCKTEGFGLFSHEKFEEFDVAENTSSFDQDIVGNAFLSKLLNMMDIEVSPQNSPTDLLLESWDKFQSSISAFQEKVPIEDERLSVIPPKSKNLDATPQSKFQGVGRPKQDSATPESMHVSTPAVREQPPFSRKRRVGLDRMIVLSNKAVIKNIKSAKDLVRFPFPRESRRTLLNAHCVQRQRESPISSLPNRFYEPLLPCSSSELQLLFSKKKMKLPNSLKIVETPGNLDVPESPIAGTPLSPSQSSDSLEIEETRRVLDVPESQASGFPKHKATDSQTPPLSQHENIEIESLETNEVPNLMDEETNSRGTNESELLAGWSGRTREVASCLHQSFLHARKQREDTVNFSQVFGGRARKESALLFYEVLVLKTTGYVDVEQNKAYGDIAISRLPKLDQTFLFDGLLE* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0758 545 MobiDBLite consensus disorder prediction 363 450 - -
Gso19g0758 545 SUPERFAMILY "Winged helix" DNA-binding domain 463 534 IPR036390 -
Gso19g0758 545 MobiDBLite consensus disorder prediction 409 428 - -
Gso19g0758 545 Gene3D Structural maintenance of chromosome 1. Chain E 462 539 IPR023093 -
Gso19g0758 545 PANTHER SCC1 / RAD21 FAMILY MEMBER 218 538 IPR039781 GO:0007062|GO:0008278
Gso19g0758 545 PANTHER SCC1 / RAD21 FAMILY MEMBER 13 184 IPR039781 GO:0007062|GO:0008278
Gso19g0758 545 MobiDBLite consensus disorder prediction 230 245 - -
Gso19g0758 545 Pfam N terminus of Rad21 / Rec8 like protein 16 87 IPR006910 GO:0005515
Gso19g0758 545 Pfam Conserved region of Rad21 / Rec8 like protein 484 534 IPR006909 -
Gso19g0758 545 MobiDBLite consensus disorder prediction 226 270 - -
Gso19g0758 545 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 13 184 - -
Gso19g0758 545 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 218 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0758 Gso-Chr19 31014130 31024505 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0758 K06670 - gmx:100810733 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0758 19 31014130 31024505 Gso16g0493 16 5810196 5818340 GST