Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1951 ATGGGTTTCAATTTGATTCTGTGGTGTCATCATCCTAATCTGGTTCTCAGTGTTTTGGTGCTCTTTTCCTGTTCCTTTTGCCTTTTCTCTGCAAATGATGAAGTGGGCACTGGTGAAGGTGAAACCTTTACTGTTTCAAGCTTCAGATACCCTGCGACTAGGCTCAGGCCCTTTGATTTGCGCTATATCAGAGTTGACTTGCCGCCATGGTTTTCTGCACTGTCTATAGCATTGAACTCAGATGTAGACCTTGATGTCTCAAGAATTGAAAGGGTTCCAATGAGCACATTGCCAATAATATGCTTTAGAGATGGAAGTCCTCCACTGCCAGATGCCTTAAATACATCTCTGAAGGATTCAGCCACCTCTGGTATAAATGATCTAGATGTGGAGCGGTGCTTTCCTATGCAGAAAAATATCACTATGAAACTGACAAACAATCAGATATCTCCAGGTGTTTGGTACATTGGTCTTTTCAATGGCATTGGACCTACAAGGACGCAGTCAAAGATGATTATCCGTGGTCCATCATTTTCCTTCATTGCTAATATAAGTGTGGAAGCATGCACAAATTCAATGATGAGGGGGGATTTCTGTAACAGTTCAGTTTATCCACTTTCATGTGCAGAATCTGATGTCTCTAATGCTTTGGAAGCTAAAATGAACAAGTCAATGTTGGAAAGTTTGGTGACCTGCAAAAGTAATTTTGAAGCTTTTTGTGTTCATGAAGGCATGCCAAACTTCTTCTCCCTGGATATTATGAATGTGGCAGAAGAAATTATCATTACGGCAGCAAATATCAGATTCAATGTTAGTCGATCAAATGATATTAGTTTAATGTGTTTTGTCCGCCATGGTGCAATGCCTTCTGTGACTTCGAATGATTATAACATTAATATTGCTAAAGGCCCACTGGTTATTCATTCACCATTAATTGGCCGTTGGTACATTAGTATAGTGCCAGTCAATCTTACAAAGACTCAGGATAACAGTGTAAGAGTTTGCTATTCAGTGGAATCTCAAGTGCTTCAATGCCCACTTGGGAAAGCTGGACCAAATTGTACAATGGATAGCTACTTGCTTCAGACATTTGTAAGGAGAGGTTCAACCCCCTTTGAGTCATATTATTTACCAGTTGTTGGAGGAGCATCGTATGATTCTGCCAATTTCCCTCTCGAGCCACTTTTAGACGACTCATCATACAGTGGAGAACCTGATAACATTTGGACTTACTTTCTTCTGAACATTCCTCGTGGTGCAGCTGGAGGAAATATTCACATACAGCTATCCTCAGATATGAAGATCAGTTATGAAGTGTATGCTAGATTTGGTGGATTACCATCTCTTGATAGCTGGGACTATTATTATGCTAACAAGACAAGGAGGAGTGATCCATCTATGTTTTTCACACTATATGACTCAAGTGATAACAAAGTTAATTTTTATATTATGTATGCTAGAGAAGGAACTTGGGGTATTGGTCTAAGACATCTTAATACCAGCAGTGATTCCATGAAAGGGCTTACTATCATGTCTATTTCACTTGAGCGATGCCCAAAACGATGCTCCTCTCATGGAGAATGTAAATTTTCTTTTGATGCTAGTGGATTGACATCGTACAGCTTCTGCTCTTGTGATCGAAACCATGGAGGCTTCGACTGTAGCATTGAGATTGTAACACATCAAGGACATGTACGGCAATCAATTTTTCTCATTGTATCAAATGCTGCAGCCATACTTCCTGCCTACTGGGCCCTTCGGAAGAAGGCATTAGCAGAATGGGTTTTATACACATCCAGTGGGATTTCAAGTGGACTATATCATGCGTGTGATGTAGGAACCTGGTGTGCATTGAACTATAATGTCTTACAGTTCATGGACTTCTGGCTCTCTTTCATGGCTGTGATTAGCACTTTCCTTTATCTAGCTACCATTGATGAAGTACTTAAGAGAGCAATCCACACAGCTGTTGCTATCCTTACTGCCCTAATGGCTGCAACAAAAGCAACCAGGTCTTCCAATGTTATTCTTGTAATTGTGATTGGTGCTCTTGGTTTGTTTATTGGATGGTTGATAGAAATCTCAACAAAGTATAGGTCCCTTTCCTTTTCAATTGGAATCTCATTTAATTTCTCTCACTGTTTCCAAACTATAAAGCAGTGGCTCTATAATCTTGTCAAGACACTTTTGAGACGGTACCACTGGGCATTTGCCTTGGCTGGTTTTCTTGCATTGGCCATGGCAGCAATAAGCTGGACACTTGAAACCAGTGAAACCTACTGGTTTTGGCATAGCATTTGGCATATTACAATATACACATCTTCTTTCTTCTTCCTTTGTTCAAAAGCAAATATTGAGGATACTGAGAATCAGCTTCCTACAAATGGAAACTATGAATTGACTCATCAGGATTCACTTCCAAGAACTGGTTAG 2433 0.4012 MGFNLILWCHHPNLVLSVLVLFSCSFCLFSANDEVGTGEGETFTVSSFRYPATRLRPFDLRYIRVDLPPWFSALSIALNSDVDLDVSRIERVPMSTLPIICFRDGSPPLPDALNTSLKDSATSGINDLDVERCFPMQKNITMKLTNNQISPGVWYIGLFNGIGPTRTQSKMIIRGPSFSFIANISVEACTNSMMRGDFCNSSVYPLSCAESDVSNALEAKMNKSMLESLVTCKSNFEAFCVHEGMPNFFSLDIMNVAEEIIITAANIRFNVSRSNDISLMCFVRHGAMPSVTSNDYNINIAKGPLVIHSPLIGRWYISIVPVNLTKTQDNSVRVCYSVESQVLQCPLGKAGPNCTMDSYLLQTFVRRGSTPFESYYLPVVGGASYDSANFPLEPLLDDSSYSGEPDNIWTYFLLNIPRGAAGGNIHIQLSSDMKISYEVYARFGGLPSLDSWDYYYANKTRRSDPSMFFTLYDSSDNKVNFYIMYAREGTWGIGLRHLNTSSDSMKGLTIMSISLERCPKRCSSHGECKFSFDASGLTSYSFCSCDRNHGGFDCSIEIVTHQGHVRQSIFLIVSNAAAILPAYWALRKKALAEWVLYTSSGISSGLYHACDVGTWCALNYNVLQFMDFWLSFMAVISTFLYLATIDEVLKRAIHTAVAILTALMAATKATRSSNVILVIVIGALGLFIGWLIEISTKYRSLSFSIGISFNFSHCFQTIKQWLYNLVKTLLRRYHWAFALAGFLALAMAAISWTLETSETYWFWHSIWHITIYTSSFFFLCSKANIEDTENQLPTNGNYELTHQDSLPRTG* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1951 810 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 14 809 IPR021910 GO:0016021
Gso18g1951 810 Pfam Protein of unknown function (DUF3522) 564 769 IPR021910 GO:0016021
Gso18g1951 810 Gene3D - 387 558 - -
Gso18g1951 810 ProSitePatterns EGF-like domain signature 1. 543 554 IPR000742 -
Gso18g1951 810 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 14 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1951 Gso-Chr18 52010406 52020530 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1951 - - gmx:100787532 1632.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1951 18 52010406 52020530 Gso9g2120 9 45481628 45491304 GST
Gso18g1951 18 52010406 52020530 Gso7g0597 7 6336397 6344776 PCT
Gso18g1951 18 52010406 52020530 Gso16g0282 16 3195145 3203400 PCT
Gso7g0597 7 6336397 6344776 Gso18g1951 18 52010406 52020530 PCT
Gso16g0282 16 3195145 3203400 Gso18g1951 18 52010406 52020530 PCT