Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0282 ATGCCTTTGAATTCGATTCCGTGGTGTCATCTCAAGCTGATTCTTCTCAGTGCGCTGTTACTTTTTTGTTGTTCTCTTGACCTCTGTTCTGCAATCACTGATTATGAGGATGATGTCTTCACTGTTTCCAGCTTCAGCTACCCTCAGACTACCCTTAGACCCTATGATTTGCGCTACATCAGAGTTGATATTATACCATGGTTTTCCGCAGTTTTCATATCATTGAACTCAGATGTAGACCTGGATGTTTCAAGAGTTGAAAGGGTGCCAAAAAGCTCTCTGCCACTATTATGCTTTAGAGATGGCAGCCCTCCTCTGCCAGATGCTTTAAATATATCTCTGAAGGATTCAGCTGTCACAGGAATAAATGGTCTTGAGGTCGAGCAGTGCTTTCCTATGGAGAAAAATATCACTATGAAATTGACAAATGAACAGATATCTCCAGGTGCTTTGTACATTGGTCTTTTCAACGGCATTGGAGATACAAGAACACAATCGAAGATGATTATCCGAGGTTCAGCATACTCCTTCAGTGCCAATATAAGTGTGGAAGCATGCTCGAATTCAATGATGAGGGGGGAGTTATGTAACAGTACAATCTCTCCACTTTCATGCACAGCATTTGATGTCTATAATTCTATGAAGGCTACAGTGAAGAAGCCAATGATGGAAAATGCAATGACCTGCAAAAGTAACTTAGAAACATTTTGTGCTCAGGAAGGTGTACCAGAATTTTACTCCTTGGATATAACAAATATGGCAGAAGAATTGACCATTATGGCGCCAAATGTTACATTCAATACTACAGCTTCAAATAACATTTCTAGTGCAAATGATGTTAGTTTAATGTGTTTTGCTCGCCATGGTGCAATTCCTTCGGAGACTTTGCATGATTATTCTGGTGATTTAAATAAAGCCCCTCTGATTATCCGTTATCCACTGATTGGTCGTTTGTACATCAGTATATTACCAATTAATGTTAAAAAAAAGTTTGGAGGGACACAGGATGAAAATTTAAAAGTTTGCTATTCAATGGAATCACGAGTGCTTCAGTGCCCACTTGGAAAGGCTGGATCAAATTGCACAATGGACAGCTACACACTTCAGACAGTTCTAAGGAGAGGTGCAACCCCCTTTGAATCATATTTTTTACCTGTGGCTATTGGTGAAGGAGCATCTTCTGCCAATTTTCCTCTTGAGCCACTTTTAAACAAGTCATCAAATGTGGGAGAAACTGGTGACATTTGGACTTATTTTACTTTGGATATTCCCCATGGTGCAGCTGGACGGAATATTCACATACGGCTATCTGCAGATGTGAAGATCAGTTATGAAGTCTATGCTAGATTTGGTGGATTGCCTTCTCTTGATAGCTGGGACTATTATTATGCTAACATGACAAGGAAGAGTGATCAATCTGTGTTTTTCATGCTATATGATTCAAGTGATGACAAAATTGACTTTTACATTATTTATGCTAGAGAAGGAACTTGGGGTATAGGTCTAAGACATCTTTATACCGGCAGTGATTCTTTGAAAGCACAAACTGTCATGTCTATTTCACTTGAAGGATGCCCTAAACAATGCTCCTCTCATGGAGATTGTAAATATTCTTTTGATGCCAGTGGATTGACATCATACAGCTTCTGCTCTTGTGATCGAAACCATGGTGGCTTTGACTGTAGCATTGAAATTGTATCACATAAAGGGCATATACTACAATCAATTTTTCTCATTGGATCAAATGCTGCAGCCATACTTCCTGCCTATTGGTCCCTTCGGCAGAAGGCATTTGCAGAATGGGTTTTGTTCACATCCAGTGGCATTGCTAGTGCACTATATCATGCATGTGACGTTGGCACCTGGTGTGCATTGAACTTTAATGTTTTACAGTTCATGGACTTCTGGCTCTCTTTCATGGCTGTGGTTAGCACTTTTGTATACCTAGCTACAATTGACGAAGTATATAAGAGGGCAATCCACACAGCTGTTGCTATCCTCACTGCCCTTTTGGCTGCAACCAAGGCAACTAGGTCTTCCAATGTTGTTCTTGTCATTGTGATTGGGGCTCTTGGTCTTCTTATTGCATGGTTGATAGAGATCTCAAAAAAGTATAGGTCCATCTCCTTTTCATTTGGATTATCGCTAAGTTTCCTTCAAAGCTTGCAAACTATAAAGCAATGGTTCTGTAATCTGGTCAAGACACTTTTGAGACGGTTTCGCTGGGGATTTTTATTGGTTGGTTTCATTACATTGGCCATGGCAGGACTAAGCTGGACGCTCGAAACCAGTGCAAACTACTGGTTTTGGCATAGCTTTTGGCATGTTACAATATATACATCTTCATTCTTCTTCCTTTGCTCAAAAGCAAACATTGTTGATGCTGAAGATTCATCATCACCCTCAAGTGGAAACTATGCACTGACTCATCAGGATTCATTTCCAAGAGGTAATTAG 2457 0.4009 MPLNSIPWCHLKLILLSALLLFCCSLDLCSAITDYEDDVFTVSSFSYPQTTLRPYDLRYIRVDIIPWFSAVFISLNSDVDLDVSRVERVPKSSLPLLCFRDGSPPLPDALNISLKDSAVTGINGLEVEQCFPMEKNITMKLTNEQISPGALYIGLFNGIGDTRTQSKMIIRGSAYSFSANISVEACSNSMMRGELCNSTISPLSCTAFDVYNSMKATVKKPMMENAMTCKSNLETFCAQEGVPEFYSLDITNMAEELTIMAPNVTFNTTASNNISSANDVSLMCFARHGAIPSETLHDYSGDLNKAPLIIRYPLIGRLYISILPINVKKKFGGTQDENLKVCYSMESRVLQCPLGKAGSNCTMDSYTLQTVLRRGATPFESYFLPVAIGEGASSANFPLEPLLNKSSNVGETGDIWTYFTLDIPHGAAGRNIHIRLSADVKISYEVYARFGGLPSLDSWDYYYANMTRKSDQSVFFMLYDSSDDKIDFYIIYAREGTWGIGLRHLYTGSDSLKAQTVMSISLEGCPKQCSSHGDCKYSFDASGLTSYSFCSCDRNHGGFDCSIEIVSHKGHILQSIFLIGSNAAAILPAYWSLRQKAFAEWVLFTSSGIASALYHACDVGTWCALNFNVLQFMDFWLSFMAVVSTFVYLATIDEVYKRAIHTAVAILTALLAATKATRSSNVVLVIVIGALGLLIAWLIEISKKYRSISFSFGLSLSFLQSLQTIKQWFCNLVKTLLRRFRWGFLLVGFITLAMAGLSWTLETSANYWFWHSFWHVTIYTSSFFFLCSKANIVDAEDSSSPSSGNYALTHQDSFPRGN* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0282 818 ProSitePatterns EGF-like domain signature 1. 550 561 IPR000742 -
Gso16g0282 818 Pfam Protein of unknown function (DUF3522) 571 776 IPR021910 GO:0016021
Gso16g0282 818 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 14 817 - -
Gso16g0282 818 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 14 817 IPR021910 GO:0016021
Gso16g0282 818 MobiDBLite consensus disorder prediction 796 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0282 Gso-Chr16 3195145 3203400 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0282 - - gmx:100816545 1573.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0597 7 6336397 6344776 Gso16g0282 16 3195145 3203400 GST
Gso18g1951 18 52010406 52020530 Gso16g0282 16 3195145 3203400 PCT
Gso9g2120 9 45481628 45491304 Gso16g0282 16 3195145 3203400 PCT
Gso16g0282 16 3195145 3203400 Gso18g1951 18 52010406 52020530 PCT
Gso16g0282 16 3195145 3203400 Gso9g2120 9 45481628 45491304 PCT