Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1946 ATGGATGTAGAAGCGGTGAAAAGGTCTCCTTCTCAAGAAAAATATGGCAGGGTTCAATCTGCAATAAGGTTGTTAGTGCTGGTTGTGTTTCTGGGTTGGATTTTCGTATGGATAGTGACTCCGACAAACACTTACCAACAAAAATGGCAGCCTCGGCTTCAAGCAAAGACTAATTCTATTTTTGGTGCACAAGGTGCAATGCTTCTGGTATACACTTTTCCAATCTTGTTCATAGCTGTTTTGGGATGTGTGTACGTTCACATAGCCAAAAAAGGAAACGGTTTCGGCAAGGAAAGCTGCAGTAGTTATGGCAAGAAACGTGAGGTATCTATATGGAAGCGTTTGGTGCTTGTGAGAGGCCCTCTTGGCATAGTTTCTGGAACAGAAATGGTCTTCTTGTTAATGTTCATTGTTCTCCTAGTTTGGTCCTTTTCAATCTATCTGCATAATGGCTTTGCCAAAATCACCCACAAATCAGCAGCAGAACACGGTCTAAAAGTCTGGGAGAAGAAACTAGATATTGCATCTGTGAGGTTGGCCCTAGTTGGGAACATATGCTTGGCATTCCTGTTTTTCCCGGTTGCTCGTGGTTCCTCAGTGCTACCTCTGCTTGGACTCACACCAGAGAGTTGCATCAAATACCATATTTGGCTAGGAAACGTGGCCATGACCCTTTTCACTGCTCATGGTATTTGTTTCATCATCTATTGGACAGTTACCGATAAACTTTCAAAGATGCTAGAATGGAAAAAAACTGGGATATCAAATGTAGCTGGAGAGGTTGCTTTGCTTGCTGGTTTGAGCATGTGGATTGCAACCATCCCTCGCAATAGGCGAAAAGTTTTTGAGCTCTTCTTCTACACTCACTACCTCTACACCCTCTTCATTGTCTTCTTCATCTTTCACGTGGGCATTTTCTATGCATGCACTATTCTCCCCGGTTTCTACCTCTTCTTGGTTGATCGGTACCTAAGGTTTTTGCAATCAAGACGCCGAGTTCGTTTGGTTTCTGCTCGTGTTTTACCATGTGAAACTGTAGAACTCAACTTCTCCAAGAGCCATGATTTGACTTATAATCCCACAAGTATTATGTTCATAAATGTACCAAGTATATCCAAACTTCAGTGGCATCCATTTACCATTACTTCTAATAGTAATTTGGAGCCAAAAATGATGAGTATTGTCATTAAAGGAGAAGGAACTTGGTCCCAGAAGCTCTACCAGATGCTTTCAACCCCTTCTGCAATTGATCATCTCAATGTCTCAGTTGAAGGTCCCTATGGACCAGCATCAACCAATTATCTAAGGTATGACACTATTGTGATGGTTAGTGGAGGGAGTGGAATCACCCCTTTTATATCCATCATCCGGGAGCTATTGTATTTGAACACAACATTCAGATATAGAACCCCAAAAGTTATCCTAATTTGTGCATTCAAGAACTCTTACTATCTCTCAATGCTAGACCTCATCCTTCCAAATTCTGGCACCCCCTATGATATGTCCAACATGCAACTACAAATTAAGGCTTACATCACAAGAAAGGAGGAGCATAGATTGGAAAACCATATTCACCTTCAACAAATATGGTTCAAACCCAAGGCAACAGATGCACCCATATCAGCTATTTTAGGTCCAAACAATTGGCTTTGGCTTTGTGCTATAATCTCGTCCTCGTTCATAATTTTCCTCATCTTAATTGGGATCATTACCCGATTCATCATTTTCCCTATAGACCATAATTCTAATAAAATATTTTCACAACCTTTGAGGTCATTCCTCAACATTTTTGCAATATGTGTGTCCATATCAATGGCAGCTAGTGCAGCTGTTCTTTGGAACAAGAAATACAACGACAGAGAAGCAAAACAGATTCAGAACTTAGAAGGATCATCATCAGCAGAATCCCCAAAGTTGAATACTGATGAAGGAGATAAAGAACTGGAAAGCCTCCCACAGCAATCCCTTGTTCAAGCTACAAAGGTGCATTATGGAGCAAGACCTGATCTAAGAAGACTGCTATTGGAACTTGAAGGGTCAAGAGTGGGAGTTTTTGTTTCTGGACCCAAGAAAATGAGGCAAGAGGTTGCTGCCATTTGCTCATCTGATTTAGGAGAAAATCTGCATTTTGAATCCTTTAGCTTTAACTGGTAG 2154 0.4109 MDVEAVKRSPSQEKYGRVQSAIRLLVLVVFLGWIFVWIVTPTNTYQQKWQPRLQAKTNSIFGAQGAMLLVYTFPILFIAVLGCVYVHIAKKGNGFGKESCSSYGKKREVSIWKRLVLVRGPLGIVSGTEMVFLLMFIVLLVWSFSIYLHNGFAKITHKSAAEHGLKVWEKKLDIASVRLALVGNICLAFLFFPVARGSSVLPLLGLTPESCIKYHIWLGNVAMTLFTAHGICFIIYWTVTDKLSKMLEWKKTGISNVAGEVALLAGLSMWIATIPRNRRKVFELFFYTHYLYTLFIVFFIFHVGIFYACTILPGFYLFLVDRYLRFLQSRRRVRLVSARVLPCETVELNFSKSHDLTYNPTSIMFINVPSISKLQWHPFTITSNSNLEPKMMSIVIKGEGTWSQKLYQMLSTPSAIDHLNVSVEGPYGPASTNYLRYDTIVMVSGGSGITPFISIIRELLYLNTTFRYRTPKVILICAFKNSYYLSMLDLILPNSGTPYDMSNMQLQIKAYITRKEEHRLENHIHLQQIWFKPKATDAPISAILGPNNWLWLCAIISSSFIIFLILIGIITRFIIFPIDHNSNKIFSQPLRSFLNIFAICVSISMAASAAVLWNKKYNDREAKQIQNLEGSSSAESPKLNTDEGDKELESLPQQSLVQATKVHYGARPDLRRLLLELEGSRVGVFVSGPKKMRQEVAAICSSDLGENLHFESFSFNW* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1946 717 SFLD Ferric Reductase Domain 41 717 - -
Gso18g1946 717 PANTHER FERRIC REDUCTION OXIDASE 2 18 716 - -
Gso18g1946 717 Gene3D - 421 544 IPR039261 -
Gso18g1946 717 Gene3D - 603 716 IPR039261 -
Gso18g1946 717 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 421 491 IPR039261 -
Gso18g1946 717 CDD NOX_Duox_like_FAD_NADP 335 514 - -
Gso18g1946 717 Pfam Ferric reductase NAD binding domain 437 701 IPR013121 GO:0016491
Gso18g1946 717 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 328 433 IPR017927 GO:0016491
Gso18g1946 717 PANTHER NADPH OXIDASE 18 716 - -
Gso18g1946 717 Pfam Ferric reductase like transmembrane component 180 299 IPR013130 -
Gso18g1946 717 SFLD Ferric reductase subgroup (FRE) 20 717 - -
Gso18g1946 717 Pfam FAD-binding domain 332 431 IPR013112 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1946 Gso-Chr18 51959999 51965604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1946 9 717 Miscellaneous Gene Families AT1G01580 55.014 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1946 K00521 - gmx:100814642 1365.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1946 18 51959999 51965604 Gso7g0590 7 6236120 6240518 PCT
Gso18g1946 18 51959999 51965604 Gso16g0277 16 3120502 3125590 PCT
Gso7g0590 7 6236120 6240518 Gso18g1946 18 51959999 51965604 PCT
Gso16g0277 16 3120502 3125590 Gso18g1946 18 51959999 51965604 PCT