Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0277 ATGCCTCAAGAAACAGTGGTGAAAAGGTCACCTTTTCAAGAAAATTGTGGGAGGCTTCAATTTGCAATAAGGCTATTAGTGGTGGTATTGCTTCTAGGTTGGATTTTCATTCGGATAATGTCGCCTACAAATACTTTTAGACAAACATGGCTGCCTCGATACAAAGCAAAGACTAATAATACAACTTATATTGGTTCAAAAGGTGCTTATCTTCTCTTGTACACTTTCCCAATCTTGCTCCTAGCTACTTTGGGATGTGTCTACCTTCACATAGGCAAAAAAGTAATCCATTCCAACACGGAGAGCTGCAATGCAAAGAAGTGTGGGGTAACCATATGGAAGCGTCCAGTGCTTATAAAAGGCCCTCTTGGCATTGTTTCTGGCACAGAGATAGCCTTCTTGTTTTTGTTCATTGCCCTCCTAGCTTGGGTCTTTTCAACTTCTGTACAAAACAGCTTTGCAACAATCACCCCACAATTTGCAGCAAAGGATGGCCAGAAAATATGGGAAGAGAAGCTAGATAGAGTAGCAAAAAGGTTAGGTGTGGTTGGGAACATATGTTTGGCATTCATGTTTTTTCCTGTGGCTCGTGGCTCATCTGTGCTGCCACTGCTTGACCTCACCTCGGAGAGTTGCATCAAGTACCATATTTGGCTTGGAAACATAGCCATGACACTTTTTACTTCTCATGGCCTTTGCTACATCATTCTTTGGGCAGTTACTGATCATACTTCTAATATGCTGGAATGGAAAAAGAATGATATATCAATTGTGGCTGGAGAGATAGCTCTGCTTTCTGGTTTGTTCCTATGGATTGCAACCATTCCCCGCATTAGGCGAAAAGTCTTTGAGCTGTTCTATTACACTCATCACCTCTACATCCTCTTCATAGTCTTCTTCATCTTTCATGTTGGCATTACCTATGCCTGCATTATGCTCCCTGGTTTCTACCTCTACTTGGTTGATCGTTACTTAAGGTTTCTGCAATCAAGGTGCCAAGTTCGTCTGGTTTCTGCGCGGGTTTTGCCATGTGAAGCTGTAGAACTCAACTTCTCTAAGGGCTATGGATTAACTTATAACCCCACAAGTGTTATGTTCATAAATATACCAAGCATATCCAAGTTGCAATGGCATCCATTTACTGTTACTTCTAATAGTAATTGGGAGCGAGACAAGCTAAGTGTTGTTATTAAATGTGAAGGAACTTGGACCAAGAAGCTCTATCAGCTGCTTTCAACATCTTCCACAATAGATCGCCTTGCTGTATCTGTTGAAGGTCCTTATGGACCTGCTTCAACCAATTATCTACGCCATGACACTCTTGTGATGGTAAGTGGAGGAAGTGGCATCACACCTTTTATCTCCATCATTAGGGAGCTAATATATCTGAACACTACATTCAAATGCAAGACCCCAAAAGTTGTCCTAATTTGTGCATTCAGAAACTCTACATCTCTGTCAATGCTAGATATGATCCTCCCAATATCTGGCACCCCATCTGAAATTTCTAATATGGAATTACAAATTGAGGCATACATCACAAGAGACGAGGAGCTTAAAGCAGATTGCCCAATTCACCCTCAAACCATATGGTTCAAGCCAAATCCATCTGATGCACCAGTACATGCTATATTAGGTCCAAACAGTTGGCTCTGGCTTGGTGCTATAATATCATCCTCTTTCATAATTTTCCTTATCTTGATAGGGATAATTACCCGTTACTACATTTTCCCTATTGATCATAACTCAAATGAAATATTTTCATTCCCGTTGAATGCATTCCTTAACATGCTAGTGATATGTGTGTCCATAGCAAGTGCTGCTAGTGCAGCTTTTCTTTGGAACAAGAAACATAATGCCAAAGAAGCAAAACAGGCTCAGAACTTGGAAGGATCAACACCAACAGTGTCACCAAACTCCATGGTTCACAATGCAGATAGAGAATTGGAAAGCCTTCCATATCAGTCCCTTATTCATGCTACTAATGTGCATTATGGTGTAAGACCAGACCTAAGAAGAATGCTACTTGAACACAAAGGTTCAAGTGTGGGTGTTCTTGCTTCAGGACCCAAAATAATGAGGCAGGAGGTTGCAGCCATTTGCTCATCTGGTTTAGCTGCGAATATGCATTTTGAGTCAATTAGCTTTAGCTGGTGA 2157 0.4108 MPQETVVKRSPFQENCGRLQFAIRLLVVVLLLGWIFIRIMSPTNTFRQTWLPRYKAKTNNTTYIGSKGAYLLLYTFPILLLATLGCVYLHIGKKVIHSNTESCNAKKCGVTIWKRPVLIKGPLGIVSGTEIAFLFLFIALLAWVFSTSVQNSFATITPQFAAKDGQKIWEEKLDRVAKRLGVVGNICLAFMFFPVARGSSVLPLLDLTSESCIKYHIWLGNIAMTLFTSHGLCYIILWAVTDHTSNMLEWKKNDISIVAGEIALLSGLFLWIATIPRIRRKVFELFYYTHHLYILFIVFFIFHVGITYACIMLPGFYLYLVDRYLRFLQSRCQVRLVSARVLPCEAVELNFSKGYGLTYNPTSVMFINIPSISKLQWHPFTVTSNSNWERDKLSVVIKCEGTWTKKLYQLLSTSSTIDRLAVSVEGPYGPASTNYLRHDTLVMVSGGSGITPFISIIRELIYLNTTFKCKTPKVVLICAFRNSTSLSMLDMILPISGTPSEISNMELQIEAYITRDEELKADCPIHPQTIWFKPNPSDAPVHAILGPNSWLWLGAIISSSFIIFLILIGIITRYYIFPIDHNSNEIFSFPLNAFLNMLVICVSIASAASAAFLWNKKHNAKEAKQAQNLEGSTPTVSPNSMVHNADRELESLPYQSLIHATNVHYGVRPDLRRMLLEHKGSSVGVLASGPKIMRQEVAAICSSGLAANMHFESISFSW* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0277 718 CDD NOX_Duox_like_FAD_NADP 336 515 - -
Gso16g0277 718 Pfam Ferric reductase like transmembrane component 180 300 IPR013130 -
Gso16g0277 718 PANTHER FERRIC REDUCTION OXIDASE 2 21 717 - -
Gso16g0277 718 PANTHER NADPH OXIDASE 21 717 - -
Gso16g0277 718 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 329 434 IPR017927 GO:0016491
Gso16g0277 718 Pfam Ferric reductase NAD binding domain 438 702 IPR013121 GO:0016491
Gso16g0277 718 SFLD Ferric Reductase Domain 43 718 - -
Gso16g0277 718 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 422 493 IPR039261 -
Gso16g0277 718 SFLD Ferric reductase subgroup (FRE) 18 718 - -
Gso16g0277 718 Pfam FAD-binding domain 333 432 IPR013112 GO:0016491
Gso16g0277 718 Gene3D - 422 539 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0277 Gso-Chr16 3120502 3125590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0277 24 718 Miscellaneous Gene Families AT1G01580 57.407 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0277 K00521 - gmx:100796460 1403.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0277 16 3120502 3125590 Gso16g0277 16 3120502 3125590 ECH
Gso7g0590 7 6236120 6240518 Gso16g0277 16 3120502 3125590 GST
Gso18g1946 18 51959999 51965604 Gso16g0277 16 3120502 3125590 PCT
Gso16g0277 16 3120502 3125590 Gso18g1946 18 51959999 51965604 PCT