Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1479 ATGGAGTACATGAACCAGAGACCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCACTAAGCACTGGTCTTGCAAAAGCATGTGGCCAAAATATTAAAGACTATATGGTGGAAAAGCTTGGCATAGACAAAAGCAAAATTGATGACTTGTCCAACCTCCTCTACGAGAACTATGGAACAACTATGGCTGGTTTAAGGGCAATTGGATATGACTTTGAATATGATGAATATCACAGTTATGTTCATGGGAGATTACCTTATGAGAATTTGAAACCAGACCCAGTTCTGAGGAACCTTTTGCTGAGCCTGCCCTATAGGAAACTGATTTTCACAAACTCAGACAAAGTCCATGCTGTTAAGGCACTAAGCAAGCTTGGATTAGAAGACTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCCATCCACAAAAGTTCTGTCTCTGATGATGAAGACGACATTGAGTTTGTGGGGGGTTCAGGCACAACAATTCCAGCACCAAAAAAAGATGTTAATAGCTTTCAAATCTTTGACCTCATTAGCCATTTTGCTAAGCCCAATCCCAACACAGTTTTGCCAAAGACACCAATTATTTGCAAACCATCAGAAAATGTCATTGAGTTGGCTCTCAAGATAGCCAACCTTAATCCACAGAGAACTTTGTTCTTTGAGGATAGTGTCCGCAACATACAAGCTGGAAAACGTGTGGGTCTTCACACTGTGCTGGTTGGAAAATCTCAGAGAATTAAAGGAGCAGATTATGCATTAGAAAGCATCCACAACCTTAGGGAGGCAGTACCAGAACTATGGGAGGGTGACATAAAATCAGAAGTTGCTTATCCTGGCAAGCATTCTGTGGAGACATCTGTGACTGCTTAG 894 0.406 MEYMNQRPKYDCLLFDLDDTLYPLSTGLAKACGQNIKDYMVEKLGIDKSKIDDLSNLLYENYGTTMAGLRAIGYDFEYDEYHSYVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNSDKVHAVKALSKLGLEDCFEGIICFETLNPIHKSSVSDDEDDIEFVGGSGTTIPAPKKDVNSFQIFDLISHFAKPNPNTVLPKTPIICKPSENVIELALKIANLNPQRTLFFEDSVRNIQAGKRVGLHTVLVGKSQRIKGADYALESIHNLREAVPELWEGDIKSEVAYPGKHSVETSVTA* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1479 297 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 5 297 - -
Gso18g1479 297 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 11 248 IPR010237 -
Gso18g1479 297 Gene3D - 98 282 IPR023214 -
Gso18g1479 297 Gene3D - 5 94 - -
Gso18g1479 297 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 5 276 - -
Gso18g1479 297 SFLD C1.5.3: 5'-Nucleotidase Like 5 276 IPR010237 -
Gso18g1479 297 Pfam Haloacid dehalogenase-like hydrolase 205 248 IPR041492 -
Gso18g1479 297 SUPERFAMILY HAD-like 9 276 IPR036412 -
Gso18g1479 297 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 203 248 IPR006439 -
Gso18g1479 297 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 5 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1479 Gso-Chr18 43740248 43743580 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1479 K07025 - gmx:100777400 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1479 18 43740248 43743580 Gso7g1138 7 15846719 15850182 GST
Gso18g1479 18 43740248 43743580 Gso3g0542 3 12678181 12682181 PCT
Gso3g0542 3 12678181 12682181 Gso18g1479 18 43740248 43743580 PCT