Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1304 ATGGGGTGTGTGATTGATGGGCGTTTCACTGTTGAGATTCAAAATGGAGTGAGCAATGGTTGTGGTGAAGTGGGTTTGTGGAATGATGGTGGTGGTGCCATTGAGGATGCTGTGAAGGTTTTGTTGGAGGGTCTAGGGGAAGATGTGAACAGGGAAGGCCTTAGAAAGACACCACTTCGTGTAGCCAAGGCCCTTCATGAAGGAACCAGAGGTTACAGACAAAAGGTGAACGACATTGTTCAAGGTGCTTTATTCCCTGAAGCTGGTCTAGATAATAGAGTTGGTCATGCAGGTGGAGCAGGTGGACTTGTGATTGTTCGAGATCTTGACTTGTTTTCCTATTGCGAGTCCTGCTTGCTTCCATTCCCGGTCAAGTGTCATGTGGGTTATGTCCCCTCTGGTGAAAGAGTTGTTGGTTTAAGCAAGCTCTCTCGTGTTGCTGATGTATTTGCAAAGCGACTTCAAGAGCCTCAGCGTCTGGCAGATGAGGTGTGTTCTGCTTTACATCAGGGAATAAGGCCAGCAGGTGTTGCTATCATACTTCAATGTTCACATATCCACTTTCCAGACATAGAATCAGTCTTTCTTGACTCAAATTATCAAGGGTGGGTGAAGATACTTGTTTCTTCAGGTTCTGGGGTTTTTGAGAACAAAAATGCAGATGTATGGGCTGATTTCTTTGGTCTTCTTAAATTTAGAGGCATCAATATGGATAAAATTCATTTTAGAGGATCATCTGATCCATGCTGGTGTCCTTCTCAGTCTTCTCTCTCTGCCAAAGTTTCCTCCAAAATAGGACCAGTCAATCCTGTAATGGTTACTGCAGTAGCTTCAGTTATTGAATCTTTGGGAGAAAATCCTTTGAGGAAGGAGCTTATAGGGACTCCAACTAGATTTGTGAAATGGTTGATGAACTTTCAAAAGAGTAACTTTAATATCAAGTTGAATGGTTTTCTTTGTGATGGGATAGATTCTTTAAATGTCAATGAGGATGTTAACATCAACAAAAAAATAACCTCTGAGTTGAACATACCTTTTTGGTCACAATGTGAGCATCATTTGCTTCCTTTTCATGGTGTTGTTCACATAGGATACCTTATGTCTGACGGATTCAATCCTATCTTAAAATCGCTTTTACAATCAATTGTACATTTTTATGGTTTCAAGCTCCAAGTTCAGGAAAGGCTTACCAGGCAGATAGCTGAAACCATTGCCCCACTGTTAGGTGGAGATGTGATAGTAGTTGTAGAGGCAAGCCACACGTGTATGATTTCGAGGGGAATTGAGAAGTTTGGAAGTAGTACGGCTACTATTGGTGTGTTAGGACATTTTTCAACCGACCCTACTGCAAGGGCATCATTCTTGAAGAGTATTCCATATCCTACATCATCTGGGGAGCAATGA 1404 0.4202 MGCVIDGRFTVEIQNGVSNGCGEVGLWNDGGGAIEDAVKVLLEGLGEDVNREGLRKTPLRVAKALHEGTRGYRQKVNDIVQGALFPEAGLDNRVGHAGGAGGLVIVRDLDLFSYCESCLLPFPVKCHVGYVPSGERVVGLSKLSRVADVFAKRLQEPQRLADEVCSALHQGIRPAGVAIILQCSHIHFPDIESVFLDSNYQGWVKILVSSGSGVFENKNADVWADFFGLLKFRGINMDKIHFRGSSDPCWCPSQSSLSAKVSSKIGPVNPVMVTAVASVIESLGENPLRKELIGTPTRFVKWLMNFQKSNFNIKLNGFLCDGIDSLNVNEDVNINKKITSELNIPFWSQCEHHLLPFHGVVHIGYLMSDGFNPILKSLLQSIVHFYGFKLQVQERLTRQIAETIAPLLGGDVIVVVEASHTCMISRGIEKFGSSTATIGVLGHFSTDPTARASFLKSIPYPTSSGEQ* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1304 467 Gene3D - 328 460 IPR043133 -
Gso18g1304 467 Gene3D - 268 311 IPR043134 -
Gso18g1304 467 Gene3D - 32 79 IPR043134 -
Gso18g1304 467 Pfam GTP cyclohydrolase I 34 186 IPR020602 -
Gso18g1304 467 Pfam GTP cyclohydrolase I 274 458 IPR020602 -
Gso18g1304 467 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 33 231 - -
Gso18g1304 467 Gene3D - 97 233 IPR043133 -
Gso18g1304 467 PANTHER GTP CYCLOHYDROLASE I 31 463 IPR001474 GO:0003934|GO:0046654
Gso18g1304 467 PANTHER GTP CYCLOHYDROLASE I 1 31 463 - -
Gso18g1304 467 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 270 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1304 Gso-Chr18 35023572 35028290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1304 K01495 - gmx:100783814 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1304 18 35023572 35028290 Gso16g0716 16 11507552 11511379 GST
Gso18g1304 18 35023572 35028290 Gso16g0716 16 11507552 11511379 PCT
Gso18g1304 18 35023572 35028290 Gso3g0751 3 26281180 26284298 PCT
Gso16g0716 16 11507552 11511379 Gso18g1304 18 35023572 35028290 PCT
Gso3g0751 3 26281180 26284298 Gso18g1304 18 35023572 35028290 PCT