Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0716 ATGGACTGTTTCGATGAGGCGAATGGGGAGCTTGAAAATGTTGTGAGTGTTGGGTGTAGTGAAGAGGGTTCTGAGAAAGAGGCAAAGACAGATATTGGTGCAATTGAGGATGCTGTGAAGGTTCTTTTGCTTGCGCTTGGGGAAGATATCAACAGGGAAGGTCTTAGGAAGACACCACTTCGTGTTGCCAAGGCCCTTCGTGAAGGAACCAGAGGGTACAGACAAAAAGTGAAGGACATTGTTGAAGGTGCTTTATTCCCTGAAGCCGGTCTAGAAAACAATAGAATTGGTCATGCAGGCGGCACAGGTGGACTTGTGGTTGTCCGAGATCTTGACCTTTATTCCTATTGTGAGTCTTGCTTGCTACCATTCCAATTCAAGTGTCATGTGGGCTATGTCCCTTCTGGCCAAAGAGTTGTGGGTTTAAGCAAACTCTCTCGAGTGGTTGATGTATTTGCTAAACGACTCCAGGAGCCTCAGCGTCTTGCAGATGAGGTTTGTTCAGCATTGCATCAAGAAATATTGCCAGCAGGTGTAGCTATTGTACTTCAGTGTACACACATCCCCTTTCCAGACATAGAATCAATCTTTCTTGAATCGAACCAACAAGTGTGGGTGAAGACACTTGTTTTGTCAGGTTCTGGGATTTTTGAAAACAAAAGTGAAGATGCATGGTCTGATTTCTTTTGCCTTCTAAGATTTAGAGGTATCAAAATAGAAAACATTCATTTGAGAGGATCATCTGACCAATGCTGGTGTCCATCTTTGACTGCTCTTTCTGCTAAAGTTTCCTCCAAAATTGTACCAGTCAATCCCGCAATGGTGACTGCAGTATCTTCAATCCTTGATTCTCTGGGAGAAGATTCATTAAGGAAGGAGCTTGCAGGGACGCCTAGTCGATTTGTGAAATGGCTATTGAACTTCCAAAGCATTGACATGGATGTGAAGCTGAATCGTTCCCTTTGTGATGGAATAGATACTTTAAACCTCGATAGGGAGGTTAACTTCAATGACAGACAAATACATTCTGAGTTGAACTTGCCATTTTGGTCACAATGTGAGCATCATATACTTCCATTTCATGGTGTTGTTCACATAGGATACTTCCTTTCAGAAGGATCTAATCCCATTGGAAAATCCCTTTTACAGTCTGTAGTACATTTTTATGGTTTCAAACTCCAGGTTCAGGAAAGGCTTACAAGGCAAATAGCAGAAACCATTGCACCACTATTATTAGGTGGACATGTAATAGTAGTTGTAGAGGCAAGTCACACATGTATGATTTCTAGAGGAATTGAGAAGTTTGGAAGTAGTACAGCTACCATTGCTGTATTAGGTCGCTTTTCCACTGACCTCGCTGCAAGGGATGCATTCTTGCAGTGTGTTGCAAGTGCTACAACTTCTGGGGGGCAATAG 1416 0.4273 MDCFDEANGELENVVSVGCSEEGSEKEAKTDIGAIEDAVKVLLLALGEDINREGLRKTPLRVAKALREGTRGYRQKVKDIVEGALFPEAGLENNRIGHAGGTGGLVVVRDLDLYSYCESCLLPFQFKCHVGYVPSGQRVVGLSKLSRVVDVFAKRLQEPQRLADEVCSALHQEILPAGVAIVLQCTHIPFPDIESIFLESNQQVWVKTLVLSGSGIFENKSEDAWSDFFCLLRFRGIKIENIHLRGSSDQCWCPSLTALSAKVSSKIVPVNPAMVTAVSSILDSLGEDSLRKELAGTPSRFVKWLLNFQSIDMDVKLNRSLCDGIDTLNLDREVNFNDRQIHSELNLPFWSQCEHHILPFHGVVHIGYFLSEGSNPIGKSLLQSVVHFYGFKLQVQERLTRQIAETIAPLLLGGHVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLAARDAFLQCVASATTSGGQ* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0716 471 PANTHER GTP CYCLOHYDROLASE I 1 468 IPR001474 GO:0003934|GO:0046654
Gso16g0716 471 Gene3D - 269 316 IPR043134 -
Gso16g0716 471 Gene3D - 22 80 IPR043134 -
Gso16g0716 471 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 272 462 - -
Gso16g0716 471 Pfam GTP cyclohydrolase I 35 188 IPR020602 -
Gso16g0716 471 Pfam GTP cyclohydrolase I 276 462 IPR020602 -
Gso16g0716 471 Gene3D - 99 235 IPR043133 -
Gso16g0716 471 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 26 233 - -
Gso16g0716 471 Gene3D - 332 465 IPR043133 -
Gso16g0716 471 PANTHER GTP CYCLOHYDROLASE I 1 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0716 Gso-Chr16 11507552 11511379 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0716 K01495 - gmx:100780537 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1304 18 35023572 35028290 Gso16g0716 16 11507552 11511379 GST
Gso16g0716 16 11507552 11511379 Gso3g0751 3 26281180 26284298 GST
Gso18g1304 18 35023572 35028290 Gso16g0716 16 11507552 11511379 PCT
Gso16g0716 16 11507552 11511379 Gso16g0716 16 11507552 11511379 PCT
Gso16g0716 16 11507552 11511379 Gso3g0751 3 26281180 26284298 PCT
Gso16g0716 16 11507552 11511379 Gso18g1304 18 35023572 35028290 PCT
Gso3g0751 3 26281180 26284298 Gso16g0716 16 11507552 11511379 PCT