Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1285 ATGTCCCTCAACCGCCTCCTTTCCGCGGCCCGCCGCTCCGACCGGCGGGCCTCCGCCCTCTCCTCCCTCCGATCCCTCTCCGCCTCCACCGCCGTGGCCCCCGCCGCCTCCTCCCCTCCCGCCCCTCCTCCCCCCACCGCCATGATCTATGACCGCGCTGCCGAGGCCGTGAAGTCCAAGCTCCGGCTGCTCGAGAACCCCGACCCCCGCTTCCTCAAGCACGGGTCCCCCCGGCCGACCCTCTCGGACCACACGCGCATCCTCTCCGCCCCCGAGACGCGCGTGACCACGCTCCCCAACGGCCTCCGCATCGCCACCGAGTCCACCCTCAGCGCCCGCACCGCCACCGTCGGCGTCTGGATCGACGCCGGGTCTCGGTTCGAGACCGAGGAGACTAACGGCACCGCGCACTTCCTCGAGCACATGATCTTCAAGGGCACCGAGAGGCGCAACGCGCGTGAGCTCGAGGAAGAGATCGAGAACATGGGAGGACACCTCAACGCCTACACCTCCAGGGAGCAGACCACCTATTATGCCAAGGTCACCGACAAGGATGTCCCCCAGGCCCTTGACATCCTCGCCGACATCCTCCAGAACTCCCGATTCGAGGAAAACCGCATCAGCCGCGAGCGCGAAGTCATTCTCCGGGAGATGGAGGAGGTTGAGGGTCAAACTGAGGAAGTGATCTTTGATCACCTACACGCCACCGCATTCCAGTACACTCCTCTTGGAAGAACCATTCTTGGACCTGCTCAGAACATTAAGACAATCACCAAAGCCCATTTGCAGAGCTACATTCAGACACATTATGCGGCTCCTAGGATGGTGATAGCTGCATCTGGAGCTGTCAAGCATGAAGACATTGTTGAACAAGTGAAAAAGTTGTTTACCAAGTTGTCAACGGATCCCACTACCACATCTCAATTAGTTGCTAAAGAGCCAGCTATTTTTACTGGTTCTGAGGTTAGAATGCTTGATGATGATATTCCCCTAGCACAATATGCTGTGGCTTTTGAAGGGGCATCTTGGAAGGATCCCGATTCAATTCCTCTCATGGTCATGCAAGCTATTTTGGGTTCTTGGAATAAGACAGCAGGAGGTGGAAAACACATGGGTTCGGAGTTAGCACAGCGAATTGGCATTAATGAAGTTGCTGAGAGCATTATGGCTTTCAACACCAATTACAAGGACACGGGTCTTTTTGGTGTTTATGCTGTTGCCAAGCCTGATAGCTTGGATGATTTGTCTTATGCTATAATGTATGAGACAACCAAGTTGGCTTATCGCGTTTCAGAAGATGATGTTACACGTGCTCGTAATCAGTTGAAATCTTCACTGCTACTACACATAGATGGAACAAGCCCGGTGGCTGAAGATATTGGCCGTCAGTTACTCACATATGGTCGAAGAATCCCGTTTGCTGAATTGTTTGCTAGAATTGATGCTGTTGATGCCAGTACGATTAAACGTGTTGCCAATCGATTTATCTATGACAAGGATGTTGTTATTGCTGCCATGGGTCCTATTCAGCGTTTGCCTGATTACAACTGGTTCAGACGTAGAACCTACTGGAACCGTTATTAG 1584 0.5372 MSLNRLLSAARRSDRRASALSSLRSLSASTAVAPAASSPPAPPPPTAMIYDRAAEAVKSKLRLLENPDPRFLKHGSPRPTLSDHTRILSAPETRVTTLPNGLRIATESTLSARTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTERRNARELEEEIENMGGHLNAYTSREQTTYYAKVTDKDVPQALDILADILQNSRFEENRISREREVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKAHLQSYIQTHYAAPRMVIAASGAVKHEDIVEQVKKLFTKLSTDPTTTSQLVAKEPAIFTGSEVRMLDDDIPLAQYAVAFEGASWKDPDSIPLMVMQAILGSWNKTAGGGKHMGSELAQRIGINEVAESIMAFNTNYKDTGLFGVYAVAKPDSLDDLSYAIMYETTKLAYRVSEDDVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDVVIAAMGPIQRLPDYNWFRRRTYWNRY* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1285 527 MobiDBLite consensus disorder prediction 1 46 - -
Gso18g1285 527 Gene3D - 80 302 - -
Gso18g1285 527 PANTHER METALLOPROTEASE 32 527 - -
Gso18g1285 527 Coils Coil 152 172 - -
Gso18g1285 527 SUPERFAMILY LuxS/MPP-like metallohydrolase 321 517 IPR011249 GO:0046872
Gso18g1285 527 PANTHER BNAA01G33220D PROTEIN 32 527 - -
Gso18g1285 527 MobiDBLite consensus disorder prediction 19 34 - -
Gso18g1285 527 Pfam Insulinase (Peptidase family M16) 103 250 IPR011765 -
Gso18g1285 527 SUPERFAMILY LuxS/MPP-like metallohydrolase 89 296 IPR011249 GO:0046872
Gso18g1285 527 Pfam Peptidase M16 inactive domain 257 442 IPR007863 -
Gso18g1285 527 ProSitePatterns Insulinase family, zinc-binding region signature. 124 147 IPR001431 GO:0004222|GO:0006508
Gso18g1285 527 Gene3D - 309 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1285 Gso-Chr18 33963179 33970808 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1285 K17732 - gmx:100777553 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1285 18 33963179 33970808 Gso16g0700 16 10622095 10637597 GST
Gso18g1285 18 33963179 33970808 Gso16g0700 16 10622095 10637597 PCT
Gso16g0700 16 10622095 10637597 Gso18g1285 18 33963179 33970808 PCT