Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0700 ATGGCCTCCAACCACCTTCTCACCCTAACCCGCCGCCTCCGCCGCCGCCTACCCTCCCTCCGCCTCTTCTCCACCTTTCCGGCGGCCACCAAGTCCCCCTCCCCTCCTGCCCCTACCCCTCCCGACGCCATGCTCTACGACCGCCTCGCGGAGGCGACCAAAGCCAAACTCCGCCGGCTCGATAACCCGGACCCACGCTTCCTGAAACACGGGTCCCCGGTGCCCGCGCTGGCGGACCACACGCGGGTCCTGGGCGCGCCCGAGACCCGCGTGACGACCCTCCCCAACGGCCTCCGCGTCGCCACGGAGTCCTCCCTCGCCTCCCAGACCGCGACTGTGGGCGTCTGGATCGACGCCGGGTCGCGGTTCGAGACGGAGGAGACCAACGGCACCGCGCACTTCCTCGAGCACATGATCTTCAAGGGCACCGCGAAGCGCACCGTCAGGGAGCTCGAGGAGGAGATCGAGAACATGGGAGGCCACCTCAACGCGTACACGTCGAGGGAGCAGACAACGTATTACGCTAAGGTCACGGAGAAGGATGTTCCTAAGGCGCTTGATATTTTGGCTGATATATTGCAGAATTCGAAGTTTGATGAAAAAAGGATTAGCCGCGAGCGTGACGTGATTCTTAGAGAAATGGAAGAGGTTGAGGGGCAAATGGAGGAAGTAATTTTTGACCATTTACATGCAACTGCTTTCCAGTACACTCCACTTGGTAGAACAATTCTTGGTCCTGCTCAGAATATTATGACAATCACTAAAGATCATCTACAAAACTACATTCAGACACACTACACGGCTCCTAGGATGGTGGTTGCTGCATCTGGAGCTGTCAAGCACGAAGAAATTGTTGAGCAAGTAAAAACATTGTTTACGAAGTTGTCAACAGATCCCACCACAGCTTCTCAATTAGTTGCAAAAGAACCAGCCATTTTTACCGGTTCTGAGGTTAGAATTTTGGATGATGATATTCCCCTTGCACAATTTGCCGTAGCTTTTGAAGGTGCTGCTTGGACAGATCCCGATTCCGTTGCTCTGATGGTCATGCAAGCTATGTTGGGTTCTTGGAATAAAACCGCAGGAGGTGGAAAACACATGGGTTCTGAGTTGGCACAACGAGTTGGCATTAATGAAGTTGCAGAAAGCATGATGGCCTTCAATACCAATTACAAGGATACAGGTCTTTTTGGTGTTTATGCTGTTGCTAACAAAGATTGTTTGGATGACTTAAGCTATGCAATAATGTACGAGACAACCAAGTTGGCTTATCGGGTTTCAGAAGATGATGTCACACGTGCTTGTAATCAGTTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAAGATATTGGGCGTCAGCTACTCACCTACGGCAGAAGAATCCCATTTGCAGAATTGTTTGCTAGAATTGACGCTGTTGATGCAAGCACAATAAAACGTGTTGCTAACCGATTTATTTATGACAAGGATATTGCAATTGCTGCTATGGGACCTATTCAGCGTTTGCCTGATTACAACTGGTTCAGGCGCAGAACCTACTGGAACCGCTACTAG 1572 0.5127 MASNHLLTLTRRLRRRLPSLRLFSTFPAATKSPSPPAPTPPDAMLYDRLAEATKAKLRRLDNPDPRFLKHGSPVPALADHTRVLGAPETRVTTLPNGLRVATESSLASQTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTAKRTVRELEEEIENMGGHLNAYTSREQTTYYAKVTEKDVPKALDILADILQNSKFDEKRISRERDVILREMEEVEGQMEEVIFDHLHATAFQYTPLGRTILGPAQNIMTITKDHLQNYIQTHYTAPRMVVAASGAVKHEEIVEQVKTLFTKLSTDPTTASQLVAKEPAIFTGSEVRILDDDIPLAQFAVAFEGAAWTDPDSVALMVMQAMLGSWNKTAGGGKHMGSELAQRVGINEVAESMMAFNTNYKDTGLFGVYAVANKDCLDDLSYAIMYETTKLAYRVSEDDVTRACNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDIAIAAMGPIQRLPDYNWFRRRTYWNRY* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0700 523 PANTHER BNAA01G33220D PROTEIN 29 523 - -
Gso16g0700 523 Coils Coil 148 168 - -
Gso16g0700 523 SUPERFAMILY LuxS/MPP-like metallohydrolase 317 513 IPR011249 GO:0046872
Gso16g0700 523 Pfam Peptidase M16 inactive domain 253 438 IPR007863 -
Gso16g0700 523 Pfam Insulinase (Peptidase family M16) 99 246 IPR011765 -
Gso16g0700 523 PANTHER METALLOPROTEASE 29 523 - -
Gso16g0700 523 ProSitePatterns Insulinase family, zinc-binding region signature. 120 143 IPR001431 GO:0004222|GO:0006508
Gso16g0700 523 Gene3D - 78 298 - -
Gso16g0700 523 Gene3D - 305 523 - -
Gso16g0700 523 SUPERFAMILY LuxS/MPP-like metallohydrolase 86 292 IPR011249 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0700 Gso-Chr16 10622095 10637597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0700 K17732 - gmx:100800696 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1285 18 33963179 33970808 Gso16g0700 16 10622095 10637597 GST
Gso18g1285 18 33963179 33970808 Gso16g0700 16 10622095 10637597 PCT
Gso16g0700 16 10622095 10637597 Gso16g0700 16 10622095 10637597 PCT
Gso16g0700 16 10622095 10637597 Gso18g1285 18 33963179 33970808 PCT