Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0617 ATGGCTTCCCCCAACAACCACAACTCTCCACCCCCCATTCCCTTCGACATGCACTCCTTCTTCAACCCCCAACCGCCCTCTTCCTCTAACCCTAACCCTAACCCTAACCCTAACCCTTCCTCCTCCTTCCCTCCGCCCTTCTCCCCCGTGCCCTTCCACTTCCCCAACTTCGACCTCCCTCTCCAGCACCAGCACCAGCACCGCTCCATCTCCTTCCCCACCCAACCCATCCCTCCCCCTTCCAACCCCAACGCCGGAGCCCGCCTCATGGCTCTCCTCGGCAACCCCTCCCCCACCCCGCCGCAACCCCCTCCGCCCGAATTCGTCCCCGCCTCCTCCTCCTCCTCCCCCTCCTCCTCCGCCATCCTCGCCGCCGCCTCCGCCGCAGCCGCGGCACTCACGCGACTCCCCAGCAGTAAGGTCCCCAAGGGCAGGCGGTTGGTCGGGGAGCACGTGGCTTACGACGTTGACGTCAGGCTGCCCGGCGAGGTCCAGCCCCAGCTCGAGGTGGCTCCGATTACCAAATACGGGTCGGATCCTAACCCGGTTCTGGGAAGGCAGATTGCGGTGAACAAGTCGTATATATGCTATGGCTTGAAACAGGGGAACATTAGGGTGCTTAATATTCACACTGCTGTCAGGTCCTTGCTCAGAGGCCACACTCAGAGGGTCACAGACTTGGCGTTCTTTGCTGAAGATGTTCATCTCTTGGCTAGTGTTGGCACAGATGGCCGTGTCTATGTGTGGAAGATCTCTGAAGGTCCAGATGATGAAGATAAGCCTCAAATTACTGCCAATATTGTTATTTCTCTTCAAATAGTGGGGGAGGAGAAAGTTGAACATCCCCAAATTTGTTGGCACTGCCACAAACAAGAGATTTTGACAGTTGGTATGGGAAAACATGTTTTAAGGATTGATACCACAAAAGTTGGAAATGGTGAAGCCTTTGTGGCAGATGATCCTCTGAGATGTCCTGTGGACAAGCTCATTGATGGGGTTCAGCTGGTAGGCACACATGATGGGGAGGTGACTGATTTGTCGATGTGCCAATGGATGACGAATCGATTGGTATCTGCGTCACAGGATGGCACGATAAAAATCTGGGAAGATCGCAAGGCACATCCACTTGCAATTTTGAGACCACATGATGGGAATCCGGTTTTTTCTGCTACATTTTTTACTGCTCCTCATCAGCCGGATCATATTGTCCTTATCACCGCAGGACCACAAAATCGGGAAGTGAAGCTTTGGGTCTCAGCAAGTGAAGAAGGTTGGCTGCTCCCAAGTGACACTGAATCATGGAAATGCACTCAGACATTGGAGTTGAAGAGTTCAGCTCAACCTTCTAAGGATGCATTCTTTAATCAAGTTGCAGCATTGTCTCATGCAGGTCTGCTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTGCATTTAGAGTATGGTCCTAATCCAGAATCAACACGCATGGATTATATAGCTGAGTTTACTGTGACAATGCCCATTCTGAGTTTTACTGGGACCAGTGATATATTGCCACATGGTGAACATATTGTTCAGGTTTATTGTGTTCAGACACAGGCTATTCAGCAGTATGCTTTGGATCTGGCTCAGTGCTTGCCTCCGCCTTACGAAAATATGGGACTAGAGAAGTCAGATTCCAGTGTTTCACGCGATCCTATTACTGTTGAAGGATTCCACTCTTTAGATTCTTCTGCAGGTAGAACAACTGAAATGTCTTTAGCCAGTTCTGCTTCAAAAACAATGTTACAAACAAGTAGTAACGATGGTGGACTTGTGGCAAGATATCCTTTGAGCTCTGGCCATGTTGAGGCACCTATTTCTAGAGAAATCAGCAATTCTAATACTGAAGCTAAACCTGTTACATTACCTCCTTCTTGTAGTGATGCTGATATTGTTTGTATTCCATCTCCACCTCTTCCTTTGAGCCCAAGGTTATCTTTGAAACTCTCCGATATCAGGAGTCCACAATCCAACTTGAGTGATCATGTTGGGGACCATCCTGTTAATGATTATTCAATAGACAGACAAATGGATACCATTCATAGGAACTTGTCTGACCCATCGAATAACAATTCAAATAATGATGAGAAGAAAATGAAGCAGGATGACATTTCTAGTGTACTTAATCCTTCTGTCATGTTTAAGCAACCAACTCATCTAATTACACCATCTGAGATCACAAAAGCTGGTTCCTCCTCTGAGACTAATATAATTGATAGGAAGAATGAGGGAGAAGCAAAGATCCAGGATGTGGTTGATGTGGGTAATGCTGAAGTGGAAGTGAAAGTGGTGGGTGAGACAAGATCTAATCAAAGTGATGAATTTGGTCGGCAGGGGTCTCAACAACATCCATATGCTGATGGTAAAGAAAAATTATTTTGCTCTCAGGCTTCAGATCTTGGTATTGAGATGGCCCGAGATTGCTGTGGGATGTCTGGGGACGCATACCTTACAGAGGAACCTGGGCAACTTGATTCAACAGTAGGAGACTCACTGGCTCAACCACCTGATGCCAGTGAGGATGGACTTCAAGACTTAGCAAAAGATGCCCATGAAAAGGTTTCTGACTCATCTACATCTGTGGCAGTGCCTCCATCTCCTGTGCCTAATGCAAAAGGGAAAAGACAGAAAGGTAAAATTTCTCAACCATCAGGCCCATCTTCCTCATCTCCAAGTGCGTGCAATTCAACTGATTCATCCCATGAACCAATTGGAAATTCTAGCCTCCCATCTGCTGAAAATGCTTTCCCTCAATTTCTGGCAATGCAAGAATCGCTCAATCAGTTATTGACAATGCAAAAAGAGATGCAGAAGCAGATGACAATGATGGTTGCTGTTCCAGTGACTAAAGAAGGTAGAAGGCTTGAGGCTGCCCTAGGGAGAAACCTGGAAAAAGCTGTCAAGTCCAACAGTGATGCTTTGTGGGCTCGAATTCAGGAGGAGAATACAAAAAGTGAAAAATTGTTACGAGACCGTATCCAGCAAGTTACAGGTTTGATTAGTAACTTTATGAATAAGGATCTACCAGTGATACTGGAGAAAACAGTAAAGAAGGAAATGGCTTCAGTTGGGCAAGCAGTAGTACGTGCTATGTCTCCTGCTGTGGAGAAAATAATATCTTCTTCTATTGTGGAGTCTTTCCAGAGAGGAGTGGGTGATAAGGCAGTGAACCAACTTGATAAATCAGTTAATTCAAAACTTGAAGCTACTGTAGCTAGGCAAATCCAAGCACAATTTCAGACAACTGGCAAGCAGGTGCTTCAGGAGACACTCAAATCCAGTTTTGAAACATCATTGGTTCCTGCATTTGAGATGTCATGTAAAGCCATGTTTGAGCAAGTGGATGCTACATTTCAGAAAGGCATGGTTGAACATTCAACTGCTGTTCAGCAACGCCTTGAATCTGCACCCACTTCGTTGGCAATGACATTAAGGGATTCCATTAATTCAGCATCATCAATTACTCAAACCTTGAGTAGAGAAGTGCTTGAGGGCCACAGAAAGCTAGTGACACTCGCAGCTACAAGAACAAACTCAGGCACATTAAATACTCTGCCTGTCCAGCTGAACAATGGTCCTTTACTTCATGAAAAGGTCGAGGTGCCTCTGGATCCCACACAAGAGCTGGCAAGGTTGATTTCTGAACGGAAATATGAGGAGGCTTTCATTGGAGCTCTACATAGAAGTGATGTATCCATTGTATCTTGGTTATGTACTCAGGTTAATTTACACGGACTTTTGTCAATGGTTCCTCTTCCTTTAAGCCAAGGTGTACTGCTTTCACTTCTTCAGCAATTGGCTTGTGATATTAACAATGATACACCGCGAAAGATTGTGTGGTTGACAGATGTGGCTGCTGCCATAAACCCGTCAGACCCAACGATTGCGATGCACACGCGATCCATCTTTGAGCAAGTCTATCAGATACTGAATCATCAACGTAGCTTGCCTACAATGACTGGAGTTGATCTCTCAAGTATCCGTCTTTTATTGCATGTCGTCAACTCCATGCTTATGACATGTAAATGA 4059 0.4614 MASPNNHNSPPPIPFDMHSFFNPQPPSSSNPNPNPNPNPSSSFPPPFSPVPFHFPNFDLPLQHQHQHRSISFPTQPIPPPSNPNAGARLMALLGNPSPTPPQPPPPEFVPASSSSSPSSSAILAAASAAAAALTRLPSSKVPKGRRLVGEHVAYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVYVWKISEGPDDEDKPQITANIVISLQIVGEEKVEHPQICWHCHKQEILTVGMGKHVLRIDTTKVGNGEAFVADDPLRCPVDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKAHPLAILRPHDGNPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASEEGWLLPSDTESWKCTQTLELKSSAQPSKDAFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPPYENMGLEKSDSSVSRDPITVEGFHSLDSSAGRTTEMSLASSASKTMLQTSSNDGGLVARYPLSSGHVEAPISREISNSNTEAKPVTLPPSCSDADIVCIPSPPLPLSPRLSLKLSDIRSPQSNLSDHVGDHPVNDYSIDRQMDTIHRNLSDPSNNNSNNDEKKMKQDDISSVLNPSVMFKQPTHLITPSEITKAGSSSETNIIDRKNEGEAKIQDVVDVGNAEVEVKVVGETRSNQSDEFGRQGSQQHPYADGKEKLFCSQASDLGIEMARDCCGMSGDAYLTEEPGQLDSTVGDSLAQPPDASEDGLQDLAKDAHEKVSDSSTSVAVPPSPVPNAKGKRQKGKISQPSGPSSSSPSACNSTDSSHEPIGNSSLPSAENAFPQFLAMQESLNQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRNLEKAVKSNSDALWARIQEENTKSEKLLRDRIQQVTGLISNFMNKDLPVILEKTVKKEMASVGQAVVRAMSPAVEKIISSSIVESFQRGVGDKAVNQLDKSVNSKLEATVARQIQAQFQTTGKQVLQETLKSSFETSLVPAFEMSCKAMFEQVDATFQKGMVEHSTAVQQRLESAPTSLAMTLRDSINSASSITQTLSREVLEGHRKLVTLAATRTNSGTLNTLPVQLNNGPLLHEKVEVPLDPTQELARLISERKYEEAFIGALHRSDVSIVSWLCTQVNLHGLLSMVPLPLSQGVLLSLLQQLACDINNDTPRKIVWLTDVAAAINPSDPTIAMHTRSIFEQVYQILNHQRSLPTMTGVDLSSIRLLLHVVNSMLMTCK* 1353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0617 1352 MobiDBLite consensus disorder prediction 830 921 - -
Gso18g0617 1352 Gene3D - 173 523 IPR015943 GO:0005515
Gso18g0617 1352 MobiDBLite consensus disorder prediction 691 712 - -
Gso18g0617 1352 SUPERFAMILY WD40 repeat-like 173 456 IPR036322 GO:0005515
Gso18g0617 1352 MobiDBLite consensus disorder prediction 775 795 - -
Gso18g0617 1352 SMART WD40_4 210 250 IPR001680 GO:0005515
Gso18g0617 1352 SMART WD40_4 332 369 IPR001680 GO:0005515
Gso18g0617 1352 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 336 369 - -
Gso18g0617 1352 MobiDBLite consensus disorder prediction 63 116 - -
Gso18g0617 1352 MobiDBLite consensus disorder prediction 26 49 - -
Gso18g0617 1352 ProSiteProfiles Trp-Asp (WD) repeats profile. 336 369 IPR001680 GO:0005515
Gso18g0617 1352 ProSiteProfiles Trp-Asp (WD) repeats profile. 217 259 IPR001680 GO:0005515
Gso18g0617 1352 MobiDBLite consensus disorder prediction 1 19 - -
Gso18g0617 1352 PANTHER ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN 20 1352 - -
Gso18g0617 1352 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 20 1352 IPR045152 GO:0031087
Gso18g0617 1352 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 217 254 - -
Gso18g0617 1352 MobiDBLite consensus disorder prediction 775 789 - -
Gso18g0617 1352 MobiDBLite consensus disorder prediction 96 111 - -
Gso18g0617 1352 MobiDBLite consensus disorder prediction 890 921 - -
Gso18g0617 1352 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 170 481 IPR032401 -
Gso18g0617 1352 Gene3D - 1264 1351 IPR044938 -
Gso18g0617 1352 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0617 Gso-Chr18 6749870 6759900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0617 K12616 - gmx:100802374 2394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0617 18 6749870 6759900 Gso8g2789 8 45643415 45653206 GST