Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0382 ATGAAGCTCGACGTAGATGTCTTGAGATATCTCTCCAAAGATGATTTTAGGGTTCTCACAGCCGTTGAATTGGGGATGCGGAATCATGAAATCGTACCCACCGAACTCATCGACCGAATTGCGCGTCTCAAGCATGGAGGCACGTACAAGGTTTTGAAAAACTTGCTCAAACACAAGTTGTTGCATCACGACTCTTCTAAATATGATGGGTTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATTAAGACTATGGTGAACAAAGGAGTGTTTGTAGCTGTTGGACGCCAGATTGGTGTTGGAAAGGAATCTGATATATTTGAGGTTGCCCGTGAAGACGGAACAGTTCTGGCTATGAAGTTGCATAGGCTTGGAAGAGTCTCTTTCCGAGCCGTCAAATCTAAGCGTGACTACTTGAGACATCGCAGTAGTTATAATTGGCTCTATTTGTCTCGCCTCGCTGCACTTAAAGAATTTGCTTTCATGAAGGCTTTGGAAACACATGGCTTCCCTGTTCCAAATGCAATAGAAAGCAATAGACATTGTGTAGTCATGTCACTCGTCCAAGGTTATCCTCTTGTTCAGGTTAAGCAGTTACTGAATCCAGAGACAGTTTTTGAGGCAATTCTTGGTCAGGTCGTTCGGTTGGCAGAGCATGGTCTCATTCATTGTGATTTCAATGAATTTAACATCATGATTAATGATGATGAAAAAATTACAATGATTGATTTTCCACAAATGGTATCTGTGTCACACCGTAATGCACAGATGTACTTTGACCGTGATGTTGAATGCATCTTTAAGTTTTTCAGGAAAAGGTTCAATCTTTCTTTTCAAGAAAGCATAGATGATATTGATGGTTCTGATGAAGGGAGAGATGAAGCTGGAAAGCCAAGTTTTTCTTCAATAGAAAGAAGTGCTGGTTTTCTAGATAGGGAGCTTGCTGCCAGTGGCTTTACTAGAAAGAATGAAGAAGATATTCAGAGGTTCATTGAAGGTGGGGCAGAAAGTGATACAAATTCAGATAGTGAAGGGGTTGACTTGGTGGAAGACCTGAATGAAGCAGACACTGTAGATGATGATTCTTCACATTTGTCAGAACAGAATGAGGGATCCGAAAGTCAAGGGAAAGAGGAGATTTGTGAAGCACGTGAAAGCAGTGGATCTGAAAAGGAAGATGCAAGTGACAATGGGGAAAGCAATGAAGATACATTGCAAAATGAAGCTGAACTCGTTAAGAACTTGAGTAAGCAACGACGACATGCCATAGCGAAAGCTCATAAGGGACGAAAGACTGTTGCAGCCAGAAATTCCTACAAAGACAAAGGTGGTAGATCATCTCACAATTCTAAAATCCAGAAACAGTTGAGCAGCTGGTGA 1383 0.4158 MKLDVDVLRYLSKDDFRVLTAVELGMRNHEIVPTELIDRIARLKHGGTYKVLKNLLKHKLLHHDSSKYDGFRLTYLGYDFLAIKTMVNKGVFVAVGRQIGVGKESDIFEVAREDGTVLAMKLHRLGRVSFRAVKSKRDYLRHRSSYNWLYLSRLAALKEFAFMKALETHGFPVPNAIESNRHCVVMSLVQGYPLVQVKQLLNPETVFEAILGQVVRLAEHGLIHCDFNEFNIMINDDEKITMIDFPQMVSVSHRNAQMYFDRDVECIFKFFRKRFNLSFQESIDDIDGSDEGRDEAGKPSFSSIERSAGFLDRELAASGFTRKNEEDIQRFIEGGAESDTNSDSEGVDLVEDLNEADTVDDDSSHLSEQNEGSESQGKEEICEARESSGSEKEDASDNGESNEDTLQNEAELVKNLSKQRRHAIAKAHKGRKTVAARNSYKDKGGRSSHNSKIQKQLSSW* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0382 460 CDD RIO2_C 94 274 IPR030484 GO:0004672
Gso18g0382 460 SUPERFAMILY Protein kinase-like (PK-like) 95 271 IPR011009 -
Gso18g0382 460 SMART rio_2 64 288 IPR000687 GO:0004674|GO:0005524
Gso18g0382 460 MobiDBLite consensus disorder prediction 359 396 - -
Gso18g0382 460 MobiDBLite consensus disorder prediction 435 449 - -
Gso18g0382 460 SUPERFAMILY "Winged helix" DNA-binding domain 5 90 IPR036390 -
Gso18g0382 460 Gene3D Transferase(Phosphotransferase) domain 1 192 339 - -
Gso18g0382 460 Pfam Rio2, N-terminal 8 89 IPR015285 GO:0004674|GO:0005524|GO:0006468
Gso18g0382 460 MobiDBLite consensus disorder prediction 419 434 - -
Gso18g0382 460 PANTHER SER/THR-PROTEIN KINASE RIO2 1 460 - -
Gso18g0382 460 Gene3D Phosphorylase Kinase; domain 1 93 190 - -
Gso18g0382 460 PANTHER BNAA01G19540D PROTEIN 1 460 - -
Gso18g0382 460 Gene3D - 1 90 IPR036388 -
Gso18g0382 460 Pfam RIO1 family 106 280 - -
Gso18g0382 460 MobiDBLite consensus disorder prediction 357 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0382 Gso-Chr18 3753544 3762435 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0382 K07179 - gmx:100789490 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0382 18 3753544 3762435 Gso13g1233 13 27409236 27416066 GST