LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso13g1233	ATGAAGCTTGACGTAGATGTCTTGAGATATCTCTCCAAAGATGATTTTAGGGTTCTCACTGCTGTTGAATTGGGCATGCGGAATCATGAAATCGTACCCACTGAACTCATAGACCGAATTGCGCGTCTCAAGCATGGAGGCACGTACAAGGTTTTGAAAAACTTGCTCAAGCATAAGTTGTTGCACCACGACTCCTCTAAATATGATGGATTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATTAAGACTATGGTGAACAAAGGAGTGTTTGTGGCTGTTGGACGTCAGATTGGCGTTGGAAAGGAATCTGATATATTTGAGGTTGCCCGTGAAGACGGAACAGTTCTAGCTATGAAGTTGCATAGGCTTGGTAGAGTCTCTTTTAGAGCTGTCAAATCTAAGCGTGACTACTTGAGACATCGCAGTAGTTATAACTGGCTCTATTTGTCTCGCCTTGCTGCGCTTAAAGAATTTGCTTTCATGAAGGCTTTGGAAACACATGGATTCCCTGTTCCAAATGCAATAGAAAACAATAGACATTGTGTAGTCATGTCACTCGTCCAGGGTTACCCTCTTGTTCAGGTTAAGCAGTTACAGAATCCAGAGACAGTTTTTGAGGCAATTCTTGGTCAGGTTGTTCGGTTGGCAGAACATGGTCTCATTCATTGTGATTTCAATGAATTTAACATCATGATTGATGATGATGAAAAAATTACAATGATTGATTTTCCACAAATGGTATCTGTGTCGCACCGTAATGCGCAGATGTACTTTGACCGTGATGTTGAATGCATCTTTAAGTTTTTCAGGAAAAGGTTCAATCTTTCTTTTCAAGAAAGCATAGATGATAATGATGATTCTGATGAAGGGAGAGATGAAGCTGGAAAACCCTGTTTTTCTTCAATAGAAAGAAGTGCTGGTTTTCTAGATAGGGAACTTGCTGCCAGTGGCTTTACTAGAAAGAATGAAGAAGATATTCAAAGGTTCATTGAAGGCGGGGCAGAAAGTGATACAAATTCAGATAGTGAAGGGGTTGACTTAGTGGAAGACCTGAATGAAGCAGACACTGTAGATGGTGATTCTTCACATTTGTTAGAACAGAATGAGGGATACAAATGTCAAGGGAAAGAGGAGAGTTGTGAAGCACGTGAAAGCAGTGGATCTGAAAAGGAAGTTGTAAGTGACAATGAGGAAAACAATGAAGAAGCATTGCAAAATGAAGCTGAACTCGTTAAGAACTTGAGTAAGCAAAGACGATGCGCCATAGCGAAAGCTCATAAGGGACGGAAGACTGTTGCTGCCAGAAATTCCTACAAAGACAAAGGTGGTAGGTCATCTCACAATTCTAAAATCCAGAAACAGTTGAGCAGCTGGTGA	1383	0.41	MKLDVDVLRYLSKDDFRVLTAVELGMRNHEIVPTELIDRIARLKHGGTYKVLKNLLKHKLLHHDSSKYDGFRLTYLGYDFLAIKTMVNKGVFVAVGRQIGVGKESDIFEVAREDGTVLAMKLHRLGRVSFRAVKSKRDYLRHRSSYNWLYLSRLAALKEFAFMKALETHGFPVPNAIENNRHCVVMSLVQGYPLVQVKQLQNPETVFEAILGQVVRLAEHGLIHCDFNEFNIMIDDDEKITMIDFPQMVSVSHRNAQMYFDRDVECIFKFFRKRFNLSFQESIDDNDDSDEGRDEAGKPCFSSIERSAGFLDRELAASGFTRKNEEDIQRFIEGGAESDTNSDSEGVDLVEDLNEADTVDGDSSHLLEQNEGYKCQGKEESCEARESSGSEKEVVSDNEENNEEALQNEAELVKNLSKQRRCAIAKAHKGRKTVAARNSYKDKGGRSSHNSKIQKQLSSW*	461

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso13g1233	460	Gene3D	Phosphorylase Kinase; domain 1	93	190	-	-
	Gso13g1233	460	CDD	RIO2_C	94	274	IPR030484	GO:0004672
	Gso13g1233	460	MobiDBLite	consensus disorder prediction	435	449	-	-
	Gso13g1233	460	SUPERFAMILY	"Winged helix" DNA-binding domain	5	90	IPR036390	-
	Gso13g1233	460	Pfam	Rio2, N-terminal	8	89	IPR015285	GO:0004674\|GO:0005524\|GO:0006468
	Gso13g1233	460	MobiDBLite	consensus disorder prediction	377	405	-	-
	Gso13g1233	460	PANTHER	SER/THR-PROTEIN KINASE RIO2	1	460	-	-
	Gso13g1233	460	SUPERFAMILY	Protein kinase-like (PK-like)	95	271	IPR011009	-
	Gso13g1233	460	MobiDBLite	consensus disorder prediction	377	396	-	-
	Gso13g1233	460	SMART	rio_2	64	284	IPR000687	GO:0004674\|GO:0005524
	Gso13g1233	460	Coils	Coil	395	419	-	-
	Gso13g1233	460	Gene3D	Transferase(Phosphotransferase) domain 1	192	339	-	-
	Gso13g1233	460	MobiDBLite	consensus disorder prediction	424	460	-	-
	Gso13g1233	460	Pfam	RIO1 family	106	280	-	-
	Gso13g1233	460	Gene3D	-	1	90	IPR036388	-
	Gso13g1233	460	PANTHER	BNAA01G19540D PROTEIN	1	460	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso13g1233	Gso-Chr13	27409236	27416066	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso13g1233	K07179		-	gmx:100797607	853.588

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso18g0382	18	3753544	3762435	Gso13g1233	13	27409236	27416066	GST