Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0370 ATGGCGCTAACCGTTTTCTCTCTCTTCTTCTTCTTCTTCCTCTCCTTCACCTTCCACCTTCCCTCCTGCTTCTCAGGGCAATCGAGCTCCATGGAATCAGTGCCTGATCTTCAGAACACTATGTACGCTTCCATCGACGGTTATCCTTGCGTGCGCCTGATGAATCTCTCTGGAACCATCGGTTGTTCAAATCCTGGACGAGATAAGGTTGTGGCTCCGATTGTAAGGTTCGAAAATGTTGACAGAATAGCTGAGCCTTCTGCTGTATTGGTGTCACTGGATGAGTTCCCAACTCTCTTTACTAGAATATCGGATGACTCTAGCTTTGCTAGTAAAGTTGGTGGTGTACTGGTTGAACCAAGCACTGATTTTCAGAAGAAGTTAAAGGGATTTTCTCCAGACCAAAAATTTCCACAAGCTCAATTCGCTCTTTATCATAATACCAGCTATGAATGGAATCCAATTGGTTCTGGTATTATGTGGAAATCCTACAATTTTCCTGTATTTTTACTCACAGAAAGTGGCTCAAAGACTCTTCAAGAGTTTGTAACAAAGAATGAGGACACAAAGAAATCTTATACTTCTAATGTGGCTGAGTTTGACCTGGTGATGCAGACAGTGAAATCTGGAACACATGATTCAGAGTCTTGTTTAAAAGAAGAAACTTGCCTTCCTTTAGGTGGATACAGTGTCTGGTCATCTCTTCCTCCGATCAACATTTCATCCTTACAACGGTCTAAGCCCATTTTATTGACAGTGGCATCTATGGATTCTGCTTCATTTTTTCGGGACAAAAGCCTTGGTGCAGACTCCCCTATTTCTGGTTTAATTGCATTACTAGCAGCTGTTGATGCACTTTCTCATTTGGATGGTCTTGGTGACCTTAGTAAACAGCTTGTTTTTGCAGTTTTCACTGGAGAGGCATGGGGTTACCTTGGAAGTAGGAGATTTTTGGTAGAACTTGACATGCACTCAGATGCTGTTCATGGCCTTAATCAGACATTAATTGAAACGGTCATTGAAATTGGTTCTGTTGGAAAGGGTCTCAGTCAAGGTGTTAAAAACTTTTTTGCTCATACAAAAGGGGATTCTTCTGCCACAAATCAGACAGTGGCTGCCTTGAAACGTGCACAGGAGTCACTGATATCTGAAAACATAAAGATAGCATCTGCAAGTGCCTCAAATCCTGGGATACCTCCATCCTCTTTAATGTCCTTTTTGGAAAAGAATCCTGCAATCTCTGGTGTTGTCCTAGAAGATTTTGACTCTGTCTTTGTCAACAAGTTCTACCATAGTCATCTTGATGATTTATCAAATGTAAATTCGTCAGCTGTAGTTGCTGCTGCTTCTCTCATTGCCCGAACCCTTTACATGCTCGCTAGTGAAACTGAAGATGTACAAAATTCAACTTTGGCTGCTATAAATGTTAATGTCTCACTTGTTGAACAACTTTTGGGTTGCTTGTTAGACTGTGATCCTGGTCTTTCTTGTGAATTGGTGAAGAAATATATTTCACCCATGTCAACATGTCCAAGCCATTATGTAGGTGTTATCTTGGACGAACCTTCATCTGCACCATATGCAGGATACATCAATGACGTTCCCAGGTTCATCTGGAATTTTCTGGCCGACAGAACTTCTATCCCAAGGGAGAATAATATCTCAGATTGTCAACATGGTTGCAATGGTAGAGATGAAGTTTGTGTCAAAGCAGAGACAGATGGCAAGGGAGTTTGTGTTCTCTCTACAACGAGGTATGTTCCAGCATATTCAACACGGCTAAAATTTGAATCAGGAGTGTGGAATGTTTTGCCCCCTAATTCCTCTGACAAAATGGGGGTTGTGGACCCTGTCTGGACAGAGAGCAACTGGAATACAATAGGTATGCGGGTCTACACAGTACAAAATGCTGCTTATGATCGTCTTGTTCTGTTTGGGGGCATCACTCTGACCGTCTTTGCATACCTTGCAATAGCAACCGCAAGAGCTTTTTTCAACAAAGCAATGAAGAGGGATTGA 2019 0.42 MALTVFSLFFFFFLSFTFHLPSCFSGQSSSMESVPDLQNTMYASIDGYPCVRLMNLSGTIGCSNPGRDKVVAPIVRFENVDRIAEPSAVLVSLDEFPTLFTRISDDSSFASKVGGVLVEPSTDFQKKLKGFSPDQKFPQAQFALYHNTSYEWNPIGSGIMWKSYNFPVFLLTESGSKTLQEFVTKNEDTKKSYTSNVAEFDLVMQTVKSGTHDSESCLKEETCLPLGGYSVWSSLPPINISSLQRSKPILLTVASMDSASFFRDKSLGADSPISGLIALLAAVDALSHLDGLGDLSKQLVFAVFTGEAWGYLGSRRFLVELDMHSDAVHGLNQTLIETVIEIGSVGKGLSQGVKNFFAHTKGDSSATNQTVAALKRAQESLISENIKIASASASNPGIPPSSLMSFLEKNPAISGVVLEDFDSVFVNKFYHSHLDDLSNVNSSAVVAAASLIARTLYMLASETEDVQNSTLAAINVNVSLVEQLLGCLLDCDPGLSCELVKKYISPMSTCPSHYVGVILDEPSSAPYAGYINDVPRFIWNFLADRTSIPRENNISDCQHGCNGRDEVCVKAETDGKGVCVLSTTRYVPAYSTRLKFESGVWNVLPPNSSDKMGVVDPVWTESNWNTIGMRVYTVQNAAYDRLVLFGGITLTVFAYLAIATARAFFNKAMKRD* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0370 672 PANTHER NICASTRIN 22 671 IPR008710 GO:0016021|GO:0016485
Gso18g0370 672 Pfam Nicastrin 248 457 - -
Gso18g0370 672 Gene3D Zn peptidases 176 477 - -
Gso18g0370 672 CDD M28_Nicastrin 43 625 - -
Gso18g0370 672 Pfam Nicastrin small lobe 49 206 IPR041084 -
Gso18g0370 672 SUPERFAMILY Zn-dependent exopeptidases 222 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0370 Gso-Chr18 3607854 3614566 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0370 K06171 - gmx:100818367 1304.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0370 18 3607854 3614566 Gso13g1245 13 27583336 27589881 GST