Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1245 ATGGAGCTAACCGTTTTCTCTCTCTTCTTCTTCTTCTTCACCTTCCACCTTCCCTCCTGCTTCTCAGGACAATCGAGCTCCATGGAATCAGTGCCTGATCTTCAGAACACTATGTACGCTTCCATCGACGGTTATCCTTGCGTGCGCCTGATGAATCTCTCTGGCACCATCGGTTGTTCAAATCCTGGACGAGATAAGGTTGTGGCTCCAATTTTAAGGTTCGAAAATGTTGACAAAATAGCTGAGCCTTCTGCTATATTGGTTTCACTGGATGAGTTTCCAACTCTCTTTACTAGAATATCAGATGACTCTAGCTTTGCTAGTAAAGTCCTTGGTGTACTGGTTGAACCAACGGGTGATGTGCAGAATAAGTTAAAGGGATTTTCTCCGGACCAAAAGTTTCCACAAGCTCAATTCGCTCTTTATCATAATACCAGCTACCAATGGAATTCAATTGGTTCTGGTATTATGTGGAAATCCTACAAGTTTCCTGTATTTTTACTCACAGAAAGTGGCTCAAAGACTCTTCAAGAGTTTGTAACAAAGAATGAGGACAAAAAGAAATCTTATACTTCTAATGTGGCTGAGTTTGATCTGGTGATGCAGACAGTGAAATCTGGAACACATGATTCAGAGTCTTGTTTAAAAGAAGAAACTTGCCTTCCTTTAGGTGGATACAGTGTCTGGTCATCTCTTCCTCCGATCAACATTTCATCCTTACAACAGTCTAAGCCCATTTTATTGACAGTGGCATCTATGGATTCTGCTTCATTTTTTCGGGACAGAAGTCTTGGTGCAGACTCCCCTATTTCTGGTTTAATTGCATTACTAGCAGCTGTTGATGCACTTTCTCATTTGGATGGTCTTGGTGACCTTAGTAAACAGCTTGTTTTTGCAGTTTTCACTGGAGAGGCATGGGGTTACCTTGGAAGTAGGAGATTTTTGGTAGAACTTGACATGCACTCAGATGCTGTTCATGGCCTTAATCATACATTAATTGAAACGGTCATTGAAATTGGTTCTGTTGGAAAGGGTCTCAGTCAAGGTGTTAAAAACTTTTTTGCTCATAAAGAGGGGGATTCTTCTGCCACAAATCAGACAGTGGCTGCCTTGAAACGTGCACAGGAGTCACTGATATCTGAAAACATAAAGATAGCATCTGCAAGTGCCTCAAATCCTGGGATACCTCCATCCTCTTTGATGTCCTTTTTGGAAAAGAATCCTGCAATCTCTGGTGTTGTCCTAGAAGATTTTGACTCTGTCTTTGTCAACAAGTTCTACCATAGTCATCTTGATGATTTATCAAATGTAAATTCATCAGCTGTAGTTGCTGCTGCTTCTCTCATTGCCCGAACCCTTTACATGCTTGCCAGTGAAACTGAAGATGTACAAAATTCTACTTTGGCTGCTATAAATGTTAATGTCTCACTTGTTGAACAACTTATGGGTTGTTTGTTGGACTGTGATCCTGGTCTTTCTTGTGAATTGGTGACAAAATATATTTCACCCATGTCAACCTGTCCAAGCCATTACGTAGGTGTTATCTTGGACGAACCTTCATCTACACCATATACAGGATACATCAATGATGTTCCCAGGTTCATCTGGAATTTTCTGGCTGACAGAACTTCTATCCCAAGGGAGAATAATAGTTCAGATTGTCAACATGGTTGCAATGGTAGAGATGAAGTATGCATCAAAGCAGAGACTGATGGCAAGGGAGTTTGTGTTCTCTCTACAACGAGGTATGTTCCGGCTTATTCAACACGGCTAAAATTTGAATCAGGAGTGTGGAATGTTTTGCCCCCTAATTCCTCTGACAAAATGGGGGTTGTGGACCCTGTCTGGACAGAGAGCAACTGGAATACGATAGGTATGCGGGTCTACATAGTACAAAATGTGGCTTATGATCGTCTTGTTCTGTTTGGGGGCATCACTCTGACAGTCTTTGCATATCTTGCGATAGCAACCGCAAGAGCCTTTTTCAACAAAGCAATGAAGAGGGATTGA 2010 0.4159 MELTVFSLFFFFFTFHLPSCFSGQSSSMESVPDLQNTMYASIDGYPCVRLMNLSGTIGCSNPGRDKVVAPILRFENVDKIAEPSAILVSLDEFPTLFTRISDDSSFASKVLGVLVEPTGDVQNKLKGFSPDQKFPQAQFALYHNTSYQWNSIGSGIMWKSYKFPVFLLTESGSKTLQEFVTKNEDKKKSYTSNVAEFDLVMQTVKSGTHDSESCLKEETCLPLGGYSVWSSLPPINISSLQQSKPILLTVASMDSASFFRDRSLGADSPISGLIALLAAVDALSHLDGLGDLSKQLVFAVFTGEAWGYLGSRRFLVELDMHSDAVHGLNHTLIETVIEIGSVGKGLSQGVKNFFAHKEGDSSATNQTVAALKRAQESLISENIKIASASASNPGIPPSSLMSFLEKNPAISGVVLEDFDSVFVNKFYHSHLDDLSNVNSSAVVAAASLIARTLYMLASETEDVQNSTLAAINVNVSLVEQLMGCLLDCDPGLSCELVTKYISPMSTCPSHYVGVILDEPSSTPYTGYINDVPRFIWNFLADRTSIPRENNSSDCQHGCNGRDEVCIKAETDGKGVCVLSTTRYVPAYSTRLKFESGVWNVLPPNSSDKMGVVDPVWTESNWNTIGMRVYIVQNVAYDRLVLFGGITLTVFAYLAIATARAFFNKAMKRD* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1245 669 PANTHER NICASTRIN 19 668 IPR008710 GO:0016021|GO:0016485
Gso13g1245 669 Gene3D Zn peptidases 173 474 - -
Gso13g1245 669 SUPERFAMILY Zn-dependent exopeptidases 219 454 - -
Gso13g1245 669 Pfam Nicastrin small lobe 46 203 IPR041084 -
Gso13g1245 669 Pfam Nicastrin 245 454 - -
Gso13g1245 669 CDD M28_Nicastrin 40 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1245 Gso-Chr13 27583336 27589881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1245 K06171 - gmx:100801506 1304.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0370 18 3607854 3614566 Gso13g1245 13 27583336 27589881 GST