Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0357 ATGTCCGCCTCATGCGGGGTGGTGGAGTGCGTTTTCGTTCTGGGCTGCGCGCGGTGGCTGTGGAAGCGCTGCACCTACGTGGGCAGCTACGACAGCGCCACTTGGCCCGCCGCCACCGCCGACGAGTTCGACCGGGTGCCGCGCGTCTGCCGCCTCATCCTCGCCAACTACGAGCCCGATCTCCGCACCCCGCAGTACCAAAAACCCACCTCCGCCACCGGCCACCGCCTGAACCCGGACTGCGTCATCAAGCGCGTGACCTACGAGGACACGCTGGGCCACGCGCCTCCGTACATAATCTACCTCGACCACGAGAACAAGGAGATCGTGCTCGCCGTGCGTGGGCTGAACCTCGCCAAAGAGAGCGACTACAAGGTTCTCCTCGATAACCGGTTAGGGCAACAAATGTTTGATGGTGGGTATGTTCATCATGGGTTGTTGAAATCGGCAGTGTGGTTGTTGAACCGTGAATCGGAGACGCTGAAGCGGTTGTGGGTGGAGAATGGTTCGGAGTATGAGATGGTTTTCGCGGGGCACTCGTTGGGTTCTGGGGTGGTGTCGCTGTTGACCATTTTGGTTGTGAATCATAGGGACCGTTTGGGTGGGATTCCCAAGGAGAAGATTCGGTGCTATGCGCTTGCTCCAGCTAGGTGTATGTCCCTGAATTTGGCTGTCAAGTATGCCAATGTCATTCATTCTATTGTTTTGCAGGATGATTTCTTGCCAAGAACGGCCACTCCATTGGAAGATATATTCAAATCAATATTCTGCTTGCCCTGCTTGTTGTTCTTGGTTTGCCTGAGAGACACCTTCATACCTGAGGGTAGAAAGCTTAGAGATCCAAGGAGACTTTATGCACCTGGAAGAATGTACCATATTGTGGAGAGAAAATTCTGCAGATGTGGGAGATTTCCTCCTGAAGTGAGGACTGCTATTCCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGTAATGCAACATCGGATCATGGAATTATTTGGATTGAAAGGGAGGCTGAGAAAGCCTTACAATTAATGAAGGCTCAGAGCTCTGAAACTGTGACAGACCCTCCAACAGTACAAAAGTTTCAGAGGTTGAAGACCATAGAGAAAGAACATAGAGATGCTTTGGAAAGAGCTGTTAGCCTGAATGTACCTCATGCAGTGGACACTGCTGAGAAAGAAACATCTGAGAACAATGAAGGTGACGACGATGCATCCGCCAGTGCAAACAATAACGTCTCAAGTAACCAATCAAAATCTAGTGGTGGAAGGTCGAACTGGGATGAGGTAGTTGAAAAACTTCTAAAGAAGAAGAGTGAAACGGGAGAACAAAACCTGGAAAGGGATACGAATGTCACACAATAA 1371 0.5055 MSASCGVVECVFVLGCARWLWKRCTYVGSYDSATWPAATADEFDRVPRVCRLILANYEPDLRTPQYQKPTSATGHRLNPDCVIKRVTYEDTLGHAPPYIIYLDHENKEIVLAVRGLNLAKESDYKVLLDNRLGQQMFDGGYVHHGLLKSAVWLLNRESETLKRLWVENGSEYEMVFAGHSLGSGVVSLLTILVVNHRDRLGGIPKEKIRCYALAPARCMSLNLAVKYANVIHSIVLQDDFLPRTATPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHGIIWIEREAEKALQLMKAQSSETVTDPPTVQKFQRLKTIEKEHRDALERAVSLNVPHAVDTAEKETSENNEGDDDASASANNNVSSNQSKSSGGRSNWDEVVEKLLKKKSETGEQNLERDTNVTQ* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0357 456 SUPERFAMILY alpha/beta-Hydrolases 39 246 IPR029058 -
Gso18g0357 456 MobiDBLite consensus disorder prediction 379 456 - -
Gso18g0357 456 CDD Lipase_3 42 243 - -
Gso18g0357 456 Pfam Lipase 3 N-terminal region 8 68 IPR005592 GO:0016042
Gso18g0357 456 Pfam Lipase (class 3) 110 245 IPR002921 GO:0006629
Gso18g0357 456 MobiDBLite consensus disorder prediction 404 427 - -
Gso18g0357 456 MobiDBLite consensus disorder prediction 431 447 - -
Gso18g0357 456 Gene3D alpha/beta hydrolase 34 254 IPR029058 -
Gso18g0357 456 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 453 - -
Gso18g0357 456 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0357 Gso-Chr18 3408083 3412453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0357 1 346 Miscellaneous Gene Families AT5G37710 75.434 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0357 - - gmx:100798831 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0357 18 3408083 3412453 Gso13g1256 13 27811074 27814916 GST