Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1256 ATGTCTGCGTCATGCGGGGTGGTGGAGTGTGTGTTCGTGCTGGGCTGCGCGCGGTGGCTGTGGAAGCGCTGCACCTACGTGGGCAGCTACGACAGCGCCACGTGGCCCTCCGCCACCGCCGACGAGTTCGACCCGGTCCCACGCGTCTGCCGCCTCATCCTCGCCAACTACGAGCCCGATCTCCGTACCCCCAACCACCGCCTCAACCCCGACTGCATCATCAAGCGCGTGACCTACGAGGACACGCTCGGCCACGCGCCGCCCTACGTAATCTACCTCGACCACGACCACAAAGAGATCGTGCTCGCCGTGCGAGGCCTCAACCTCGCCAAAGAAAGTGACTATAAAGTTCTCCTCGATAACCGGTTGGGGCAGCAGATGTTTGATGGTGGATACGTTCATCGTGGGTTGTTGAAATCGGCGGTGTGGCTGCTCAACCGTGAATCGGAGACGCTGAAGCGGTTGTGGGTGGAGAATGGTTTGGAGTATGAGATGGTTTTCGCGGGGCATTCGTTGGGTTCTGGGGTGGTGTCGCTGTTGACGATTTTGGTTGTGAATCATAGGGACCGTTTGGGTGGGATTCCCAAGGAGAAGATTCGTTGCTATGCGCTTGCTCCAGCTAGGTGTATGTCCCTCAATTTGGCTGTCAAGTATGCCAATTTCATTCATTCTATTGTTTTGCAGGATGATTTCTTGCCAAGAACTGCTACTCCATTGGAAGATATATTCAAATCAATATTCTGCTTGCCCTGCTTATTGTTCTTGGTTTGCCTGAGAGACACCTTCATACCTGAGGGTAGAAAGCTTAGAGATCCAAGGAGGCTTTATGCACCTGGAAGAATGTACCATATTGTGGAGAGAAAATTTTGCAGATGTGGGAGATTTCCTCCTGAAGTGAGGACTGCTATTCCCGTTGATGGAAGATTTGAGCATATAGTCTTGTCCTGTAATGCAACATCAGATCATGGAATTATTTGGATTGAAAGGGAAGCTGAGAAAGCTTTACAATTAATGAAGGCTCAGAGCTCTGAAACTGTGACAGACCCTCCAACTGTACAAAAGTTTCAGAGGTTGAAGACCATAGAGAAAGAACATAGAGATGCTTTGGAAAGAGCTGTTAGCTTAAATGTACCTCATGCAGTGGACACTGCAGAGAACGAACCGTCTGAGAACAATGAAGGTGATGATGCATCCGGTAATGGAAGAAATAACGTCTCAAGTAACCAATCAAAATCTAGTGGTGGAAGGTCAAACTGGGATGATGTAGTTGAAAAACTACTAAAAAATAAGAGAGAGACGGGAATGGGAGAACAAAACCTGAAAAGGGATACGAATGTCACACAATAA 1347 0.4922 MSASCGVVECVFVLGCARWLWKRCTYVGSYDSATWPSATADEFDPVPRVCRLILANYEPDLRTPNHRLNPDCIIKRVTYEDTLGHAPPYVIYLDHDHKEIVLAVRGLNLAKESDYKVLLDNRLGQQMFDGGYVHRGLLKSAVWLLNRESETLKRLWVENGLEYEMVFAGHSLGSGVVSLLTILVVNHRDRLGGIPKEKIRCYALAPARCMSLNLAVKYANFIHSIVLQDDFLPRTATPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHGIIWIEREAEKALQLMKAQSSETVTDPPTVQKFQRLKTIEKEHRDALERAVSLNVPHAVDTAENEPSENNEGDDASGNGRNNVSSNQSKSSGGRSNWDDVVEKLLKNKRETGMGEQNLKRDTNVTQ* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1256 448 MobiDBLite consensus disorder prediction 393 417 - -
Gso13g1256 448 MobiDBLite consensus disorder prediction 371 448 - -
Gso13g1256 448 Pfam Lipase (class 3) 101 236 IPR002921 GO:0006629
Gso13g1256 448 SUPERFAMILY alpha/beta-Hydrolases 35 238 IPR029058 -
Gso13g1256 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 445 - -
Gso13g1256 448 CDD Lipase_3 42 234 - -
Gso13g1256 448 Gene3D alpha/beta hydrolase 36 245 IPR029058 -
Gso13g1256 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 445 - -
Gso13g1256 448 MobiDBLite consensus disorder prediction 421 438 - -
Gso13g1256 448 Pfam Lipase 3 N-terminal region 8 65 IPR005592 GO:0016042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1256 Gso-Chr13 27811074 27814916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1256 1 337 Miscellaneous Gene Families AT5G37710 75.872 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1256 - - gmx:100819276 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0357 18 3408083 3412453 Gso13g1256 13 27811074 27814916 GST