Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0322 ATGGAGGAACCAAACCCGTGTATATTCAACCCTGCAATTTTGGATTCTCTCACTGATGATGCGGTGCAAGAAATCCTCGACGGCTACAATGGCTTCTGCAACGCTACGCAATCACTTCTCGTCGGTAACGGCGATCTCTCCGTCGCTCCCGACTTTGTTTCTCTTGTTCACGTTCTCTGCAAACACCGCCTCCGTTCCCTCGTTCAAGACCACTTTTTTCGACTCCTAGAGGAGACGTTTGAACGAAATGGGGCATCGAGATTTTGGCGCCATTTTGATCCTTATTCTCGTGTTGCAGGTTTGAACAAGAATGATGACCTTGATATTGATGAGGATGAGATTCAGAGTGTGTTGTATAAAGCTTTGGAAGATATTACTTTGGAGAAACAATATCAGGAGAAGTGTCTATTGATGTTGGTGCATGCTTTGCAATCTTACAAGGACCAGGTGTCAGAGGATAAGCATGGTTTTGAAGGAGACAGAAATTACCTTACCTCTAAGTATCAATGGATTGTCTCTTCTGTACTCATGGCCTCACTTCCTCGGCATTTCCCTGTTATACTGCATTGGTATTTTAAAAGAAAACTGGAGGAGTTGAGTACCATTATGGATGGAGAGTTCGGTGATGATGCATCTCAAAATAAGGATTGCATGGATTTAGATGAAAAAGGAAAACTATGCAACAAAGTTGGTGAAATGGATGTTGATGAGTGCTATAATGACCATAGGTTCTCGGAAAACTGTAAACTTGTGAAGAACATTGGAAAAGTTGTTCTTGATCTTAGGAATCTTGGATTTACTTCCACGGCTGAAGATGCTTATGCTTCTGCTATATTTTTACTACTGAAGGCAAAAGTACATGATGTAGCTGGTGATGATTTTCGGAGTTCTGTTTTACAATCTATCAAAAGCTGGATACAGGCTGTTCCTCTTCAGTTTCTTCATGCGCTTCTTGTCTATCTTGGTGATGTCGTTAGTTATGAGAGTACTTCATCAGGTCTGAAATCACCTTTGGCACCACAGCCATCTTCATGCTGTCCTGGAATTGATACTCCCTCTGAAGGGCTTGTGAGATGGAAGTTGCGGCTGGAATATTTTGCATATGAAACACTACAAGATTTAAGAATAGCCAAATTATTCGAGATAATTGTTGATTATCCTGAGAGCTCTCCTGCAATTGAAGACTTAAAATTGTGTCTTGAATACACTGGACAACATTCAAAGCTGGTGGAATCATTTATTTCAGCACTGCGTTATCGCTTGCTTACTGCAGGCGCCTCAACCAATGATATATTACACCAATATGTTTCAACTATCAAAGCACTTAGGACAATAGACCCTGCAGGTGTTTTCCTTGAGGCAGTTGGTGAACCCATAAGAGATTATTTAAGAGGAAGGAGAGATACCATAAAGTGCATAGTAACCATGATGACAGATGGGACTGGTGCACATTCAAGTTCATCTGGAAATCCTGGAGATAGCCTTCTCGAAGAGTTGAACAGAGATGAAGAGATTCAAGAGAATGCTGGTGTTGATGATGATTTTAACACTGATGATAGGCAAGCATGGATCAATGCCATGCGATGGCAACCTGACCCTGTGGAAGCAGATCCATTAAAGGGAAGCAGAAACCAAAGGAAGGTTGACATCCTTGGGATGATTGTTGGCATAATTGGTTCAAAAGATCAATTAGTTCATGAATATCGAACTATGCTTGCCGAGAAACTTCTAAATAAATCAAATTATGATATTGATTCAGAGATACGTACTTTAGAACTCCTCAAGATACACTTTGGAGAGAGCAGCCTACAGAAATGTGAGATTATGCTCAATGATCTAATTGGCTCAAAGAGAATCAACAGTAACATTAAAGCTACCATAAATCAGCCATCTCAGACCAGTGTTGAATTGGGAGACAGTGCAATATCCATGGATGTAATTTCTGCTACTATCATATCTTCTAATTTCTGGCCTCCAATACAGGATGAGCCCCTTAACCTGCCTGAGCCTGTTGACCAGCTCCTATCTGATTATGCAAAGAGATTTAATGAAATCAAAACACCACGTAAGCTGCTGTGGAAAAAAAGTCTTGGAACCATCAAGCTGGAGTTGCAGTTTCAAGATAGGGAAATGCAATTCACAGTAGCACCTGTTCATGCATCTATCATTATGAAATTTCAAGATCAACCAAGTTGGACCTCTAAAAAGCTTGCAGCTGCTATTGGGGTACCTGCAGATGTTTTAAATCGGAGAATAAATTTCTGGATAAGCAAGGGAATCATTGCAGAGTCACAAGGGGCAGATTCCTCTGACCATGTATACACCATTGTGGAAAACATGGCTGAGCCAAGTAAGAATGGAGCCAGTACTGGTTGTGCTCAGGAACTTCTAGGAGGTGAAGAGGAGGAAGAGAGATCTGTGGCATCTGTGGAAAATCAACTTCGTAAGGAAATGACTGTATATGAGAAATTTATCCTGGGGATGCTCACAAACTTTGGTAGCATGGCATTAGATCGAATTCACAATACTCTCAAGATGTTTTGCATTGCCGATCCCCCATATGACAAGTCACTCCAGCAACTACAAAGCTTTTTATCTGGTCTAGTTTCTGAGGAGAAGTTAGAACTTCGGGATGGAATGTACTTTCTAAAGAAGTAG 2658 0.4105 MEEPNPCIFNPAILDSLTDDAVQEILDGYNGFCNATQSLLVGNGDLSVAPDFVSLVHVLCKHRLRSLVQDHFFRLLEETFERNGASRFWRHFDPYSRVAGLNKNDDLDIDEDEIQSVLYKALEDITLEKQYQEKCLLMLVHALQSYKDQVSEDKHGFEGDRNYLTSKYQWIVSSVLMASLPRHFPVILHWYFKRKLEELSTIMDGEFGDDASQNKDCMDLDEKGKLCNKVGEMDVDECYNDHRFSENCKLVKNIGKVVLDLRNLGFTSTAEDAYASAIFLLLKAKVHDVAGDDFRSSVLQSIKSWIQAVPLQFLHALLVYLGDVVSYESTSSGLKSPLAPQPSSCCPGIDTPSEGLVRWKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKLCLEYTGQHSKLVESFISALRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRRDTIKCIVTMMTDGTGAHSSSSGNPGDSLLEELNRDEEIQENAGVDDDFNTDDRQAWINAMRWQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSNYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSKRINSNIKATINQPSQTSVELGDSAISMDVISATIISSNFWPPIQDEPLNLPEPVDQLLSDYAKRFNEIKTPRKLLWKKSLGTIKLELQFQDREMQFTVAPVHASIIMKFQDQPSWTSKKLAAAIGVPADVLNRRINFWISKGIIAESQGADSSDHVYTIVENMAEPSKNGASTGCAQELLGGEEEEERSVASVENQLRKEMTVYEKFILGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLKK* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0322 885 SMART APC2_2 824 883 IPR014786 -
Gso18g0322 885 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 14 885 IPR044554 -
Gso18g0322 885 Pfam Anaphase promoting complex (APC) subunit 2 824 881 IPR014786 -
Gso18g0322 885 ProSiteProfiles Cullin family profile. 553 756 IPR016158 -
Gso18g0322 885 Gene3D Cullin; Chain C, Domain 2 644 786 - -
Gso18g0322 885 Gene3D Cullin Repeats 527 630 - -
Gso18g0322 885 SMART cul_2 549 706 IPR016158 -
Gso18g0322 885 PANTHER BNAC04G32030D PROTEIN 14 885 - -
Gso18g0322 885 SUPERFAMILY "Winged helix" DNA-binding domain 814 884 IPR036390 -
Gso18g0322 885 Pfam Cullin family 547 753 IPR001373 GO:0006511|GO:0031625
Gso18g0322 885 Gene3D - 800 885 IPR036388 -
Gso18g0322 885 SUPERFAMILY Cullin homology domain 526 780 IPR036317 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0322 Gso-Chr18 2957543 2964658 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0322 K03349 - gmx:100805741 1741.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0322 18 2957543 2964658 Gso13g1294 13 28358814 28366091 GST