Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1294 ATGGAGGAACCAAACCCGTGTTTTTTCAACCCTGCAATTTTGGATTCTCTCACTGACGATTCGGTGCACGAAATCCTCGACAGCTACAATGACTTTTGCAACGCTACGCAATCCCTTCTCGCCGGTAACGGCGATCTCTCCGTCGCTTCCGACTTCGTTTCTCACGTTCACACTCTCTGCAAGCACCGCCTCCGTTCCCTCGTTCAAGACCATTTTTTTCGACTCCTAGAGGAGACGTTTGAACGAAATGGGGCATCGAGATTTTGGCGCCATTTTGATCCTTATTTTCATGTTGCGGGTTTGAACAAGAATGATGACCTTGATATTGATGAGGATGAGATTCAGAGTGTGTTGTATAATGCTTTGGAAGAGATTACTTTGGAGAAACAATATCAGGAGAAGTGTCTGTTGATGTTGGTGCATGCTTTGCAATCTTACAAGGACCAGGTGTCAGAGGATAAGCATGGTTTTGAAGGAGACAGGAATTACCTTACCTCCAAGTATCAATGGATTGTCTCTTCTGTACTTATGGCTTCGCTTTCTCGGCATTTCCCTGTTATACTGCATTGGTATTTTAAAAGAAAACTGGAGGAGGTAAGTGCAATTATGGATGGAGAGTTCTGTGATGATGCATCTCAAAATAAAGATGGCATGAATTTAGATGAAAAAGGAAAAATATGCAACAAAGTTGGTGAAATGGATGTTGATGAGTGCTATAGCGACCATAGGTTCTCGGAAAACAGTAGACTTGTGAAGAACATTGGAAAAGTTGTTCTTGATCTTAGGAATCTTGGATTTACTTCCATGGCTGAAGATGCTTATGCTTCTGCTATATTTTTACTACTGAAGGCAAAAGTACATGATGTAGCTGGTGATGATTTTCGGAGTTCTGTTTTACAATCTATTAAAAGCTGGATACAGGCTGTTCCTCTTCAGTTTCTTCATGCACTTCTTGTCTATCTTGGTGATGTCGTTAGTTATGAGAGTACTTCATCAGGTCTGAAATCACCTTTGGCACCACAGCCATCTTCATGCTGTCCTGGAATTGATACTCCCTCTGAAGGGCTTGTAAGGTGGAAGTTGCGGCTGGAATATTTTGCATATGAAACACTACAAGATTTAAGAATAGCCAAATTATTCGAGATAATTGTTGATTATCCTGAGAGCTCTCCGGCAATTGAAGACTTAAAATTGTGTCTTGAATACACTGGACAACATTCAAAGCTGGTGGAATCATTTATTTCAGCACTGCGTTATCGCTTGCTTACTGCAGGCGCGTCAACCAATGATATATTACACCAATATGTTTCAACTATTAAAGCACTTAGGACAATAGACCCTGCAGGTGTTTTTCTTGAGGCAGTTGGTGAACCCATAAGGGATTATCTAAGAGGAAGGAGAGATACCATAAAGTGCATAGTAACCATGATGACAGATGGGACTGGTGCACATTCAAGTTCATCTGGAAATCCTGGAGATAGCCTTCTTGAAGAGTTGAACAGAGATGAAGAGATTCAAGAGAATGCTGGTGTTGATGATGATTTTAACACTGATGATAGGCAAGCATGGATCAATGCCATGCGATGGCAACCTGACCCTGTGGAAGCAGATCCATTAAAGGGAAGCAGAAACCAAAGGAAGGTTGACATACTTGGGATGATTGTTAGCATAATTGGTTCAAAAGATCAATTAGTTCATGAATATCGAACTATGCTTGCCGAGAAACTTCTAAATAAATCAGATTACGATATTGATTCAGAGATACGTACTCTAGAACTCCTCAAGATACACTTTGGAGAGAGCAGCCTACAGAAATGTGAGATTATGCTCAATGATCTAATTGGCTCAAAGAGAACCAACAGTAACATTAAAGCTACCATAAATCAGCCATCTCAGACAAGTGTTGAAGTGGGAGACAATGCAATATCCATGGATGCAATTTCTGCTACTATCATATCTTCTAATTTCTGGCCTCCAATACAGGATGAGCCCCTTAACCTGCCTGAGCCTGTTGACCAGCTCCTATCTGATTATGCAAAGAGATTTAATGAAATCAAAACTCCCCGTAAGCTGCAGTGGAAAAAAAGTCTTGGAACCATCAAGCTGGAGTTGCAGTTTCAAGATAGGGAAATACAATTCACAGTAGCGCCTGTTCATGCATCTATCATTATGAAATTTCAAGATCAACCAAGTTGGACCTCTAAAAACCTTGCAGCTGCTATTGGGATACCTGCAGATGTTTTAAATCGGAGAATAAATTTCTGGATAAGCAAGGGAATCATTGCAGAGTCGCAAGGGGCAGATTCCTCTGACCATGTATACACCATTGTGGAAAACATGGCTGAGACAAGTAAGAATGGAGCTAGTACTGGTTGTGCTCAGGAACTTCTAGGAGGTGAAGAGGAGGAAGAGAGATCTGTGGCATCGGTGGAAAATCAACTTCGTAAGGAAATGACTGTATATGAGAAATTTATCCTGGGGATGCTCACAAACTTTGGTAGCATGGCATTAGATCGAATTCACAATACTCTCAAGATGTTTTGCATTGCCGATCCCCCATATGACAAGTCACTCCAGCAACTACAAAGCTTTTTGTCTGGTCTAGTTTCTGAGGAGAAGTTAGAACTTCGGGATGGAATGTACTTTCTAAAGAAGTAG 2658 0.4112 MEEPNPCFFNPAILDSLTDDSVHEILDSYNDFCNATQSLLAGNGDLSVASDFVSHVHTLCKHRLRSLVQDHFFRLLEETFERNGASRFWRHFDPYFHVAGLNKNDDLDIDEDEIQSVLYNALEEITLEKQYQEKCLLMLVHALQSYKDQVSEDKHGFEGDRNYLTSKYQWIVSSVLMASLSRHFPVILHWYFKRKLEEVSAIMDGEFCDDASQNKDGMNLDEKGKICNKVGEMDVDECYSDHRFSENSRLVKNIGKVVLDLRNLGFTSMAEDAYASAIFLLLKAKVHDVAGDDFRSSVLQSIKSWIQAVPLQFLHALLVYLGDVVSYESTSSGLKSPLAPQPSSCCPGIDTPSEGLVRWKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKLCLEYTGQHSKLVESFISALRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRRDTIKCIVTMMTDGTGAHSSSSGNPGDSLLEELNRDEEIQENAGVDDDFNTDDRQAWINAMRWQPDPVEADPLKGSRNQRKVDILGMIVSIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSKRTNSNIKATINQPSQTSVEVGDNAISMDAISATIISSNFWPPIQDEPLNLPEPVDQLLSDYAKRFNEIKTPRKLQWKKSLGTIKLELQFQDREIQFTVAPVHASIIMKFQDQPSWTSKNLAAAIGIPADVLNRRINFWISKGIIAESQGADSSDHVYTIVENMAETSKNGASTGCAQELLGGEEEEERSVASVENQLRKEMTVYEKFILGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLKK* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1294 885 Gene3D Cullin Repeats 526 630 - -
Gso13g1294 885 SMART APC2_2 824 883 IPR014786 -
Gso13g1294 885 PANTHER BNAC04G32030D PROTEIN 14 885 - -
Gso13g1294 885 Pfam Anaphase promoting complex (APC) subunit 2 824 881 IPR014786 -
Gso13g1294 885 Gene3D Cullin; Chain C, Domain 2 645 786 - -
Gso13g1294 885 SUPERFAMILY Cullin homology domain 526 779 IPR036317 -
Gso13g1294 885 ProSiteProfiles Cullin family profile. 553 756 IPR016158 -
Gso13g1294 885 SMART cul_2 549 706 IPR016158 -
Gso13g1294 885 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 14 885 IPR044554 -
Gso13g1294 885 SUPERFAMILY "Winged helix" DNA-binding domain 814 884 IPR036390 -
Gso13g1294 885 Pfam Cullin family 546 753 IPR001373 GO:0006511|GO:0031625
Gso13g1294 885 Gene3D - 800 885 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1294 Gso-Chr13 28358814 28366091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1294 K03349 - gmx:100785428 1733
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0322 18 2957543 2964658 Gso13g1294 13 28358814 28366091 GST